Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00809 ATGTGGATGGTGGTGCTTTCTTCCCCGCAAACCCTAGCACAAACAGCGTTCCTCCGAAATTCAATTCCCAGCCCAACCAGAGTGTCCCTTTCTCTCAAAACCCCGTGTTCTTCATTAACAGCAAAATGCCAGCAACAACAAAAAACTCAAGAAGACGGCATTCCCGCGGACGAGGTTAAAATCCTTGCGAAATTCAAGTCCCGCCACAACTACATCCGCGTTCTAGAAGTTTCTAGAAAAGCAGAACACCCCTTCCGCGGCTCCAGGCTCCTCCTTCTCGACACCCCCGGAAACATCCACAGCATATCTTTCCTCTTCAAGTCCCTCACCaATACTTACTTCGACGTCTTCGCCACGCTCCCTCCCATCGTTCCCCCCGGCCCCCTCGCCCTCCTCGGCTTCGGCGCCGGCACCGCCGCCCGCCTCCTCCTCCTCCACCACCCCTCCGCCCTCCTCCACTGCTGGGAGCTCGACCCCGCCGTCATCCAGGTCGCCCGCGAGTACTTCAACCTCGCCCGCCTCGAGAGGGACAACCAAGACCGCCTCTTCATCTACGTCGGCGACGCCCTCAACGCCACCGTCCCCAACGGCTTCTCCGGGATCGTCGTCGACCTCTTTTCGAAGGGCTCTTTAATCCCCGAGCTCCAGGATCCCGCCACTTGGCGGATGCTGAGGGGGAGGTTGAGGAAGGGAGGGAGGATCATGGTGAACGTTGGCGGGAGCTGCGTGGAGGCGGAGAATAGGCTCAGAGATGGGAAGGTTGTTATGGAAGAGACTCTCGGAGCGATGAAGGAGGTTTTCGGAAAGAAGGTTTTTGTTCTGAGTCTGGGGAATCGTAAGGATGATAGCTCGCTTGCTCTCACTGGGGATTTGCCTCACCTTGAGGAATGGAAGAACCGCCTTCCTGGTCCCTTCAAATGTTACGCTGACATGTGGACACCTTACTCTCACAGAGGAGTTCACATGGGTGGGAGACCATATCACAAAGAAGTTCTTATTGAAGTCTCCTCCTCACTCACCTCCTCAGCACTCGCTCTGCTCATTCAGGTCGCCTGCCCTTGCTATTTGGACAAGACAAATCAGGGGTTTCCAAATAAGTTAAACATGATAAAACGGTTTCCAAGTAGGAACAACCAGAGGTCCAAAGGCATCAAGAATGAATTTGCCAACGATTCAAAACTGTCAGTCAGTACACAGACAGATCTGATCCTGAAACTTGGTAGGAGAGACCTTCATCCAGGTAAGCATGAAGAAATTCAGAATGAAAAACATGAGGAGgaagaggaagatgaacataatgaagaggatgaagaaaataaACATGGCCATGAAGAACAAGAAGATGGAAACAAGCATGAAACTGAGGAACGTGAAGAGTACAAGCATGAAGGCAGAGAACAAGGGGACGAAGAAAATAAGCATGGAGCAGAAGACCAGGAGGAAGCTGAAAACGAAAATGAAGATGAAGGAAGAGGAGGAGGAGGAGACGATGATATAGATGAAAATGATCAAGAGAAATCAGAGTTGGATAATACTGATCGTGATGATGAGTTATTGGATGGAGAGCAAGAAAAAGAAGAGGTTGATGAGAAGGAGAATGAAAACGAGGATGATGAAAAGGAGAGTTTAGTTGAAAACCACAACAATCATGAGGCCCGGGAGGAACATTACAAGGGGGATGATGCTTCTAGTGCTGTGGCTCATGATACTCATGCAACTAGCACTGAAACTGAGACACTTAGTTTGGAAAACTCTGATGTAAACTTAGAAATGAATATTCCAAAACCTGAAAATGAGACAACTTATTCAGACGAAAGTGTCGGGAAGCAAAATGATTCAGATTTGAAGGTTTCAGAAGGTGACATGATAGATGGTATTTCTTCAAACACAACTGCTGTTCAAGAGACTGGAAATAACACTTTGTCCAACCCTGTGGATGATAGCTCATTACTAAATAAAACAACTGCAACAAACTCTGACAGTCACTTGGAATCAAGCAGTAACCTGACAGTAGTGACCACTGAAGCAAGCAATAACTTGACCGGAGCTGGTAATGACACATCAAGTTCATCTGAACAAAATAAAAAAGTGATGTTATCTGAATCTGACCAAGCTCAAAGCAGCACGATGAACACAACAATCCCTGGAGATATAAAAAATGTGCAGACAGAGGGATTAGAGCAGAGTGGCAATAGAACTTCAGATGAAAACCTGCATGATACCAATTCGACGATCTCTGTTAAAACTGAAAATGGAGGTGTGGATGCAGGAGAATCATCTAATCTAGTAGCTTCGAATGTAACCGAGAACACTTACAGAAATGAGAGGTCTGAATCTGATATTTCTGAAAGTGGCAAGTTCAACGGTAACTCTGAAACAAGTGAAACAGATGAAAATCAGAATGTTGATGCCACAGAGGATGAGATGTTCAAAGGTGACACACTAACAGGTGAAACTGATGAAACATCAGACTCTTCCTCTGCCAACAAAACTATGGATTCAGCTGAACAAGATGCAATTGATTCTTCTGATACTCATATACACGAGGATGTGGCTGAGGCTCTAACTGATCTTGATACACTACCAGATATCAGAAATGAAGGAGATGACAGTGACGAAACTGCTGCAGAGTAA 2634 0.4617 MWMVVLSSPQTLAQTAFLRNSIPSPTRVSLSLKTPCSSLTAKCQQQQKTQEDGIPADEVKILAKFKSRHNYIRVLEVSRKAEHPFRGSRLLLLDTPGNIHSISFLFKSLTNTYFDVFATLPPIVPPGPLALLGFGAGTAARLLLLHHPSALLHCWELDPAVIQVAREYFNLARLERDNQDRLFIYVGDALNATVPNGFSGIVVDLFSKGSLIPELQDPATWRMLRGRLRKGGRIMVNVGGSCVEAENRLRDGKVVMEETLGAMKEVFGKKVFVLSLGNRKDDSSLALTGDLPHLEEWKNRLPGPFKCYADMWTPYSHRGVHMGGRPYHKEVLIEVSSSLTSSALALLIQVACPCYLDKTNQGFPNKLNMIKRFPSRNNQRSKGIKNEFANDSKLSVSTQTDLILKLGRRDLHPGKHEEIQNEKHEEEEEDEHNEEDEENKHGHEEQEDGNKHETEEREEYKHEGREQGDEENKHGAEDQEEAENENEDEGRGGGGDDDIDENDQEKSELDNTDRDDELLDGEQEKEEVDEKENENEDDEKESLVENHNNHEAREEHYKGDDASSAVAHDTHATSTETETLSLENSDVNLEMNIPKPENETTYSDESVGKQNDSDLKVSEGDMIDGISSNTTAVQETGNNTLSNPVDDSSLLNKTTATNSDSHLESSSNLTVVTTEASNNLTGAGNDTSSSSEQNKKVMLSESDQAQSSTMNTTIPGDIKNVQTEGLEQSGNRTSDENLHDTNSTISVKTENGGVDAGESSNLVASNVTENTYRNERSESDISESGKFNGNSETSETDENQNVDATEDEMFKGDTLTGETDETSDSSSANKTMDSAEQDAIDSSDTHIHEDVAEALTDLDTLPDIRNEGDDSDETAAE 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00809 877 Coils Coil 443 463 - -
Gma17g00809 877 MobiDBLite consensus disorder prediction 623 772 - -
Gma17g00809 877 Coils Coil 416 439 - -
Gma17g00809 877 MobiDBLite consensus disorder prediction 567 588 - -
Gma17g00809 877 MobiDBLite consensus disorder prediction 481 506 - -
Gma17g00809 877 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 34 314 - -
Gma17g00809 877 MobiDBLite consensus disorder prediction 436 480 - -
Gma17g00809 877 Gene3D Vaccinia Virus protein VP39 68 304 IPR029063 -
Gma17g00809 877 MobiDBLite consensus disorder prediction 407 422 - -
Gma17g00809 877 MobiDBLite consensus disorder prediction 540 565 - -
Gma17g00809 877 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 60 272 IPR029063 -
Gma17g00809 877 MobiDBLite consensus disorder prediction 804 818 - -
Gma17g00809 877 MobiDBLite consensus disorder prediction 407 877 - -
Gma17g00809 877 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 34 314 - -
Gma17g00809 877 MobiDBLite consensus disorder prediction 594 608 - -
Gma17g00809 877 MobiDBLite consensus disorder prediction 837 877 - -
Gma17g00809 877 MobiDBLite consensus disorder prediction 514 539 - -
Gma17g00809 877 MobiDBLite consensus disorder prediction 783 798 - -
Gma17g00809 877 Coils Coil 514 553 - -
Gma17g00809 877 MobiDBLite consensus disorder prediction 819 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00809 Gma-Chr17 6773958 6780639 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00809 - - gmx:100820291 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00809 17 6773958 6780639 Gma17g00809 17 6773958 6780639 ECH
Gma17g00809 17 6773958 6780639 Gma13g01436 13 29132744 29135787 GST
Gma17g00809 17 6773958 6780639 Gma15g01877 15 23873788 23878890 PCT
Gma17g00809 17 6773958 6780639 Gma09g00847 09 12454870 12459872 PCT
Gma15g01877 15 23873788 23878890 Gma17g00809 17 6773958 6780639 PCT
Gma09g00847 09 12454870 12459872 Gma17g00809 17 6773958 6780639 PCT