Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01436 ATGGGTTCTCAGATAAGGCTTCTGGGTCTGTGTCTATGGATGTACTTGTCAAGCTTAAGCTTCATTGGAGCCGGTGCTGTGTATGGAAGAGAAGGTGAAGTTGTGAAAGGGATTGTTTTAGTTCATGGGAAAACTGCAATTGGAAGGATTGATGATGATTCTGTTTGTGCAACTCTGGATTGGTGGCCTCCTCAGAAATGTGACTATGGAAAATGCAGTTGGGGTCATGCTTCTCTGCTCAACCTGGACCTCAACAACAAAATTTTGTTAAATGCAGTAAAAGCCTTTTCACCCTTGAAAATTAGATTAGGTGGCACTTTGCAAGACAAGGTCATGTATGGAACTGAAGATTGTCGGCAACCCTGTACTCCTTTTGTTTTGAATGCGAATGAAATGTTCGGTTTCACTCAAGGGTGCTTACCGATGTATAGGTGGGATGAGCTAAACAGCTTTTTCCAAAAAGCAGGGGCTAAGGTTGTCTTTGGATTAAATGCTCTTGCTGGAAAATCTATGAAGTCTGGTTCTGCTGTTGGACCTTGGAACTACACCAATGCTGAATCGTTAATACGATACACAGTCAGAAAGAAGTACACCATTCATGGTTGGGAACTTGGCAATGAATTGTGTGGAAGTGGAATTGGAGCAAGTGTTGCAGCAGATCAATATGCTTCTGATGTTGCTGCTTTAAGAAACATAGTTGAAAATGCATATAGAGGGATTGAACCTAAGCCACTAGTCATTGCACCTGGAGGCTTCTTTGACTCGGATTGGTTCAAGGAATTTATAAGCAAATCTGGTAAATCTGCAGACGTGATCACCCACCACATTTATAACCTTGGGCCAGGAGTTGATGACCACCTAACTGAAAAAATTCTTGACCCTTCCTATCTGGATGGAGAGGCTAACACATTCAGCAGCCTCAAAGGTATACTTCAAAGTTCATCAACCTCAGTAAAATCATGGGTTGGTGAGGCAGGAGGGGCTTACAATAGTGGCCATCATCTTGTGTCTGATGCATTTGTCTACAGCTTCTGGTATTTGGACCAGCTTGGCATGTCAGCTGTTTATGACACCAGAACATACTGCAGACAAAGTTTGATAGGAGGAAACTATGGTTTGCTGAATACTAGTACTTTCGTGCCAAATCCAGACTATTATAGTGCACTTCTATGGCACCGACTCATGGGAGGCCGTGTCCTCTTAACTACCTTCTATGGGACAAAGAAGATAAGAACTTATGCACATTGTGCAAAGGAATCCAAAGGGATCACAATACTAGTGCTCAACTTGGACAACAGCACCACTGTTCAAGTCAATGTGGCCTTAAAATTTAACAAGTTACCATACCGTAGAGTGGGTGAACCAGCCAGAAGAGAGTACCATTTAACTGCACCAGACAGGAATTTACATAGCCAAACTATGTTGCTAAATGGAAAAATGTTAAGTGTAAACTCAGCTGGTGAAATTCCTCCTTTAGAGCCTCTATATGTAAACTCAAGAAAGCCAATAATAGTTGGTCCTCTATCTATTGTATTTGCTCATATACCAAATGTTCTTCTTTCGGCCTGCAGCTAA 1575 0.4197 MGSQIRLLGLCLWMYLSSLSFIGAGAVYGREGEVVKGIVLVHGKTAIGRIDDDSVCATLDWWPPQKCDYGKCSWGHASLLNLDLNNKILLNAVKAFSPLKIRLGGTLQDKVMYGTEDCRQPCTPFVLNANEMFGFTQGCLPMYRWDELNSFFQKAGAKVVFGLNALAGKSMKSGSAVGPWNYTNAESLIRYTVRKKYTIHGWELGNELCGSGIGASVAADQYASDVAALRNIVENAYRGIEPKPLVIAPGGFFDSDWFKEFISKSGKSADVITHHIYNLGPGVDDHLTEKILDPSYLDGEANTFSSLKGILQSSSTSVKSWVGEAGGAYNSGHHLVSDAFVYSFWYLDQLGMSAVYDTRTYCRQSLIGGNYGLLNTSTFVPNPDYYSALLWHRLMGGRVLLTTFYGTKKIRTYAHCAKESKGITILVLNLDNSTTVQVNVALKFNKLPYRRVGEPARREYHLTAPDRNLHSQTMLLNGKMLSVNSAGEIPPLEPLYVNSRKPIIVGPLSIVFAHIPNVLLSACS 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01436 524 PANTHER HEPARANASE-LIKE PROTEIN 3 3 523 - -
Gma13g01436 524 Gene3D Glycosidases 72 393 - -
Gma13g01436 524 SUPERFAMILY (Trans)glycosidases 50 395 IPR017853 -
Gma13g01436 524 PANTHER HEPARANASE-RELATED 3 523 - -
Gma13g01436 524 Pfam Glycosyl hydrolase family 79, N-terminal domain 38 351 IPR005199 GO:0016020|GO:0016798
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01436 Gma-Chr13 29132744 29135787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01436 8 524 Glycoside Hydrolase AT5G61250 46.125 5.86e-173 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01436 K07964 - gmx:100778008 1072.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01436 13 29132744 29135787 Gma13g01436 13 29132744 29135787 ECH
Gma17g00809 17 6773958 6780639 Gma13g01436 13 29132744 29135787 GST
Gma13g01436 13 29132744 29135787 Gma15g01877 15 23873788 23878890 PCT
Gma13g01436 13 29132744 29135787 Gma09g00847 09 12454870 12459872 PCT
Gma15g01877 15 23873788 23878890 Gma13g01436 13 29132744 29135787 PCT
Gma09g00847 09 12454870 12459872 Gma13g01436 13 29132744 29135787 PCT