Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01877 ATGAGTTCTCGTATTCGGCTTCTGGGTATTTGCTTGTGGCTGCACCTGACATGCTTCACCTTCATTTTTGGCAACATAGTGAGTGTAAGAGGAGATGCAACTTTGCAAGGGACTGTTGCCATTGATGACAAGGTTGTGATTGGAACCATTGATGATGATTTTGTTTGTGCAACTTTGGATTGGTGGCCTCCTGAGAAATGTGACTATGGAAGATGCAGTTGGGGACTTGCTTCTCTTCTCAATCTGgacctcaacaacaagatattcttaaatgcagtgaaagccttttcacctttgaaacttAGACTAGGTGGAAGTTTGCAAGACAAGGTAATATATGGCACTGAAGATAACCACCAACCTTGTACACCTTTTGTTAAGAACCCTTCTGAGATGTTTGGTTTCACTCAAGGGTGCCTCCCAATGGATAGATGGGATGAACTTAACTACTTTTTTGAAAAAGCTGGagctaagattatctttggattaaatgctcttgctggaaaatcaatacacagtggttctgcaaaaggaccttggaactacaccaaTGCCGAGTCCTTTATTCGATATACTGTTGGAAATGGCTACAGCATTTATGGATGGGAACTTGGCAATGAATTGAGTGGGAGTGGAGTTGGAACAAGCATTACAGCAGACCAATATGCTTTGGATGTTGCTGCTTTACACGACGTAGTTTACAATGCATATGAAAAGACTGAGCCTAAGCCACTAGTAATTGCACCTGGAGGTTTCTTTGATGCAAACTGGTTCAACATATTTATAAGCAAATCAGGAAAATCTATTGATGTGGTCACTCACCACATTTATAACCTTGGACCAGGAGTTGATGAGCACCTGGTGGAAAGAATTCTGGACCCTTCCTATCTTGATAAAGAGGCTAGCACATTCAATGGCCTAAAAAATATACTTGCAAGTACAGGTACCTCAGCAACAGCATGGGTTGGTGAGTCTGGAGGTGCCTACAATAGTGGCCATCATCTTGTATCCGATGCATTTGTTTACAGTTTCTGGTATTTGGATCAGCTTGGCATGTCAGCTGCTTATGACACTAAAACATATTGCAGACAGAGTTTGATAGGAGGAAACTATGGTTTACTCAATACTACGAATTTTCTGCCAAATCCAGATTACTATAGTGCTCTTCTTTGGCACCGACTCATGGGAAGACATGTCCTCTCAACTACCTTCTCTGGGACAAACAAGATAAGAGCTTATGCACACTGTGCAAAGCAATCAAAAGGAATCACAGTACTATTGATCAACCTGGACAGCAACACAACTGTTGAAGCTGAAGTGACCTTCAACAACAACGCTGAGAGTTTGAGGCACAGAAAGATGTCTAGTCATTCAAAAAGGATGGAACTGCCTCTTGCAAGTGAAACAGCAAGAGAGGAGTACCATCTAACTCCACAGGATGGGGATATACATAGCCAAACAATGGTACTAAATGGAAAAGCTCTGAGTGTAAACTCAGATGGTGACATTCCTCCTTTGGAGCCTATATATGTGAACTCATCAGAGCCAATAAGGGTTGCTGCTTTCTCTATTGTATTTGCCCATTTACCTGATGCTGTTGTTTCAGCCTGTGGCTAA 1617 0.3859 MSSRIRLLGICLWLHLTCFTFIFGNIVSVRGDATLQGTVAIDDKVVIGTIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFLNAVKAFSPLKLRLGGSLQDKVIYGTEDNHQPCTPFVKNPSEMFGFTQGCLPMDRWDELNYFFEKAGAKIIFGLNALAGKSIHSGSAKGPWNYTNAESFIRYTVGNGYSIYGWELGNELSGSGVGTSITADQYALDVAALHDVVYNAYEKTEPKPLVIAPGGFFDANWFNIFISKSGKSIDVVTHHIYNLGPGVDEHLVERILDPSYLDKEASTFNGLKNILASTGTSATAWVGESGGAYNSGHHLVSDAFVYSFWYLDQLGMSAAYDTKTYCRQSLIGGNYGLLNTTNFLPNPDYYSALLWHRLMGRHVLSTTFSGTNKIRAYAHCAKQSKGITVLLINLDSNTTVEAEVTFNNNAESLRHRKMSSHSKRMELPLASETAREEYHLTPQDGDIHSQTMVLNGKALSVNSDGDIPPLEPIYVNSSEPIRVAAFSIVFAHLPDAVVSACG 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01877 538 PANTHER HEPARANASE-LIKE PROTEIN 3 5 537 - -
Gma15g01877 538 SUPERFAMILY (Trans)glycosidases 50 395 IPR017853 -
Gma15g01877 538 Pfam Glycosyl hydrolase family 79, N-terminal domain 37 351 IPR005199 GO:0016020|GO:0016798
Gma15g01877 538 PANTHER HEPARANASE-RELATED 5 537 - -
Gma15g01877 538 Gene3D Glycosidases 73 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01877 Gma-Chr15 23873788 23878890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01877 31 537 Glycoside Hydrolase AT5G61250 47.876 1.86e-178 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01877 K07964 - gmx:100802477 1104.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01877 15 23873788 23878890 Gma15g01877 15 23873788 23878890 ECH
Gma15g01877 15 23873788 23878890 Gma09g00847 09 12454870 12459872 GST
Gma17g00809 17 6773958 6780639 Gma15g01877 15 23873788 23878890 PCT
Gma13g01436 13 29132744 29135787 Gma15g01877 15 23873788 23878890 PCT
Gma15g01877 15 23873788 23878890 Gma17g00809 17 6773958 6780639 PCT
Gma15g01877 15 23873788 23878890 Gma13g01436 13 29132744 29135787 PCT