Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00768 ATGCGACGACGGGCTGCCGAGTATCGGCGCCCGGCACGACGGAGGTTTTCATATTGGATCTGGCTTCTCCTTGCTTTCTCCTCCATCCTCGGATTGCTCCTCTTCCTTCTGCAGCACAATCACCACCACCAAGATCCGCTTCATCATCCTTTGCCCGAGAGAAATGCAAGAGTTGAACATTTTGCTAAGGAGGGCTTGAATTTTACTGAAGAGATTTTAAGTGTAGCATCATTTTCGCGGCAGTTAGCGGAACAAATGATCCTGGCCAAGGCTTATGTGGTTATTGCCAAAGAACACAACAATCTTCACCTTGCCTGGCAGCTTAGCTCAAAGATCAGAAGTTGCCAGCGTTTGCTTTCGAAAGCTGCCATGACTGGTGAGCCCATCACACTGGAGGAAGCAGAGCCAATTATTAAAAGCCTTTCTTTTCTAATGTTTAAGGCACAAGATATCCATTATGACATTGCAACCACAATAGTGACTATGAAATCACATATTCAAGCTCTCGAAGAGCGGGCCAATGCAGCAATAGTTCAAAGCACTGTGTTTGGTCAAATAGCAGCCGAAGCAGTACCTAAGAGTCTTCATTGTCTAAATGTGAAACTCATGTCTGATTGGCTAAAGATGCCATCCCTGCAAGAATTCTCAGACGAGAGGAAAAACTCCCCACGGCTTGTGGACAACAATCTATATCATTTCTGCATATTTTCAGATAATATACTGGCAACATCTGTAGTTGTAAACTCAACTGTCTCTAATGCAGATCATCCAAAGCAATTAGTCTTTCACATTGTCACTAATGGAGTCAATTATGGGGCAATGCAAGCATGGTTCCTAAATAATGACTTTAAAGGAGCCACCATAGAGGTACAAAACATTGAGGAGTTTCATTGGTTGAATGCATCTTATTCTCCTCTTGTCAAGCAGCTCCTCAATCCTGATTCACAAACCATCTATTTTGGAGCATATCAAGATTTAAATGTTGAACCcaaaatgcgtaatcccaagtatttgtctttactgaatcatctccggttttacatccctgagatttatccgcaacttgagaaggttgtcttcctggatgatgaccttgttgtccagaaggatcttacctctcttttctctctggatttgcatgggaatgtgaatggtgcagttgaaacttgtcttgaagcatttcatcgttactacaagtatctcaacttctcaaactcaattattagctcgaggtttgatccacaggcatgtgcatgggcatttggtATGAACATTTTTGACTTGGTTGCATGGCGGAAGGCAAACGTGACCGCAAGATATCACTATTGGCAAGAGCAGAATGCTGATGGGACTCTTTGGAAGCTGGGGACACTTCCTCCTGCTCTTCTTTGTTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTAAATATTGACAACCGCCTCATTGAAAGTGCAGCAGTTATTCACTTCAATGGGAACATGAAGCCATGGTTGAAGTTAGCTATAGGCAGGTATAAGCCACTATGGGACAAGTACATAAATCAAAGTCACCCTCATCTACAAGATTGTGCCACAAGTTGA 1611 0.3569 MRRRAAEYRRPARRRFSYWIWLLLAFSSILGLLLFLLQHNHHHQDPLHHPLPERNARVEHFAKEGLNFTEEILSVASFSRQLAEQMILAKAYVVIAKEHNNLHLAWQLSSKIRSCQRLLSKAAMTGEPITLEEAEPIIKSLSFLMFKAQDIHYDIATTIVTMKSHIQALEERANAAIVQSTVFGQIAAEAVPKSLHCLNVKLMSDWLKMPSLQEFSDERKNSPRLVDNNLYHFCIFSDNILATSVVVNSTVSNADHPKQLVFHIVTNGVNYGAMQAWFLNNDFKGATIEVQNIEEFHWLNASYSPLVKQLLNPDSQTIYFGAYQDLNVEPKMRNPKYLSLLNHLRFYIPEIYPQLEKVVFLDDDLVVQKDLTSLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSRFDPQACAWAFGMNIFDLVAWRKANVTARYHYWQEQNADGTLWKLGTLPPALLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWDKYINQSHPHLQDCATS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00768 536 CDD GT8_like_1 231 524 - -
Gma17g00768 536 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 533 IPR029044 -
Gma17g00768 536 Pfam Glycosyl transferase family 8 236 510 IPR002495 GO:0016757
Gma17g00768 536 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 233 533 IPR029044 -
Gma17g00768 536 PANTHER HEXOSYLTRANSFERASE 3 536 - -
Gma17g00768 536 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 536 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00768 Gma-Chr17 6465850 6469326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00768 1 533 Glycosyltransferase AT2G20810 56.134 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00768 K13648 - gmx:100805886 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00768 17 6465850 6469326 Gma17g00768 17 6465850 6469326 ECH
Gma17g00768 17 6465850 6469326 Gma05g00176 05 1660590 1663699 GST
Gma17g00768 17 6465850 6469326 Gma04g01534 04 41399893 41403369 PCT
Gma04g01534 04 41399893 41403369 Gma17g00768 17 6465850 6469326 PCT