Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01534 ATGCGGCGGCGGGCCGCCGAGTATCGGCGCCCGGTTCGGCGGCGGTTCTCTCATTGGATCTGGTTGCTTCTCGGCGCGTTCTCCCTTGCTGGTTTGGTTTTGTTCTTCGTGCAGCACAATCACCGCGAGGATCGGATCCAACAGCCCCTTCTGGAGAAAAATGCTATAGTTGAACATATTGCCAAGAGATATAATTTTACTGAGGAAATTTTAAGTGCAACATCCTTTTCACGGCAGTTAGCGGAGCAAATGGTTCTGGCCAAGGCTTATGTGATTATTGCCAAAGAGCACAATAATCTTCACCTTGCCTGGGAGCTTAGCTCAAAGATTAGAAGTTGTCAGCTTTTGCTTTCAAAAGCTGCCATGACTGGGGAGCGTCTGACCATGGAGGAAGCTGAGCCAATTATTAAAAGCTTGTCTTCTCTAATTTTCAAGGCACAAGATGTCCATTATGACATTGCAACCACTATAGCAACAATGAAATCACATATTCAAGCACTTGAAGAGCGTGCAAATACAGCAACAGTTCAAAGTACTGTGTTTGCTCAAATATCAGCTGAAGCACTACCCAAGAGTCTTCATTGCTTTAATGTGAAACTTATGGCTGATTGGCTGAAGATGCCATCCCTGCAAAAACGAGAACATGAGAGTAGAATCTCCCCCCGGCTCACAGATAACAATCTATATCATTTCTGCATTTTTTCAGATAATGTACTGGCTACATCTGTAGTTATTAACTCAACAGTCATGAATGCTGACCATCCAAAACAGTTAGTCTTTCACATTGTTACTGATGGTATCAATTATGGAGCAATGCAAGCATGGTTCTTCAGTAGTGACTTTAAAGGGGCTACCTTAGAGGTGCAGAATATTGAGGAATTTTATTGGTTGAATGAATCTTATTCTCCAATTGTCAAACAGCTACACATTCCAGAATCACGATCCTTTTATTTTGGACCTTATCAAGGTGCAAATGTTGAGCCAAAATTGCAAAACCCCAAGTTTTTGTCTTTACTAAATCATCTTCGGTTTTACATTCCTGAGATTTATCCACTACTTGAGAAGGTTGTTTTCCTAGATGATGATGTTGTTGTTCAGAAGGACCTAACCCCACTTTTCTCACTGGATTTGCATGGAAATGTGAATGGAGCTGTTGAAACTTGTCTAGAAGCCTTTCATAGGTACTACAAGTATCTCAACTTCTCAAATTCAATTATAAGCTCAAAGTTTGATCCACAAGCATGTGGATGGGCACTTGGTATGAATGTGTTTGACTTGTTTTCATGGAGGAAAGCAAATGTGACTGCAAGGTATCATTATTGGCAGGAGCAGAATGCTGATGAGACACTCTGGAAGCTCGGTACTCTTCCACCTGCTCTTTTAAGCTTTTATGGTTTGACAGAACCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTAAACATTGACAACCGCCTCATTGAAAGTGCCGCAGTTATTCACTTTAATGGGAACATGAAACCATGGCTGAAGTTAGCTATAGGCAGGTACAAGCCATTATGGCACAAGTACATAAACCAAAGTCACCCCCATCTACAAGATTGTGCTGCAGGTTAA 1605 0.4181 MRRRAAEYRRPVRRRFSHWIWLLLGAFSLAGLVLFFVQHNHREDRIQQPLLEKNAIVEHIAKRYNFTEEILSATSFSRQLAEQMVLAKAYVIIAKEHNNLHLAWELSSKIRSCQLLLSKAAMTGERLTMEEAEPIIKSLSSLIFKAQDVHYDIATTIATMKSHIQALEERANTATVQSTVFAQISAEALPKSLHCFNVKLMADWLKMPSLQKREHESRISPRLTDNNLYHFCIFSDNVLATSVVINSTVMNADHPKQLVFHIVTDGINYGAMQAWFFSSDFKGATLEVQNIEEFYWLNESYSPIVKQLHIPESRSFYFGPYQGANVEPKLQNPKFLSLLNHLRFYIPEIYPLLEKVVFLDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSKFDPQACGWALGMNVFDLFSWRKANVTARYHYWQEQNADETLWKLGTLPPALLSFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWHKYINQSHPHLQDCAAG 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01534 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 531 IPR029044 -
Gma04g01534 534 PANTHER HEXOSYLTRANSFERASE 3 533 - -
Gma04g01534 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 533 IPR029993 GO:0047262
Gma04g01534 534 CDD GT8_like_1 229 522 - -
Gma04g01534 534 Pfam Glycosyl transferase family 8 233 508 IPR002495 GO:0016757
Gma04g01534 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 231 531 IPR029044 -
Gma04g01534 534 Coils Coil 157 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01534 Gma-Chr4 41399893 41403369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01534 1 531 Glycosyltransferase AT2G20810 53.731 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01534 K13648 - gmx:100784212 1083.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01534 04 41399893 41403369 Gma04g01534 04 41399893 41403369 ECH
Gma17g00768 17 6465850 6469326 Gma04g01534 04 41399893 41403369 PCT
Gma05g00176 05 1660590 1663699 Gma04g01534 04 41399893 41403369 PCT
Gma04g01534 04 41399893 41403369 Gma17g00768 17 6465850 6469326 PCT
Gma04g01534 04 41399893 41403369 Gma05g00176 05 1660590 1663699 PCT