Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00176 ATGCGACGACGGGCTGCCGAGTATCGGCGCCCGGCACGACGGAGGTTTTCATATTGGATCTGGCTTCTCCTTGCTTTCTCCTCCATCCTCGCTTTGCTCCTTTTCCTTCTCCAACACAATCACCACCACCAAGATCCGCTTCATCATCCTTTGTCAGAGAGAAATGCAAGAGTTGAACATTTTGCTAAGGAGGGTTTCAATTTTACTGAAGAGATTTTAAGTGTAACATCATTTTCGCGACAGTTAGCAGAACAAATGATTCTGGCCAAGGTTTATGTGGTTATTGCCAAAGAACACAACAATCTTCACCTTGCCTGGCAGCTTAGCTCAAAGATCAGAAGTTGTCAGCTTTTGCTTTCAAAAGCTGCCATGACTGGTGAGCCTGTCACATTGGAGGAAGCAGAGCCAATTATTAAAAGCCTTTCTTTTCTAATGTTTAAGGCACAAGATATCCATTATGACATTGCAACCACAATAGTGACTATGAAATCGCACATTCAAGCTCTTGAAGAGCGTGCCAATGCAGCAATAGTTCAAAGCACTGTGTTTGGTCAAATAGCAGCGGAAGCAGTACCTAAGAGTCTTCATTGTCTAAATGTGAAACTCATGTCTGATTGGCTAAAGATGCCATCCCTGCAAGAATTCTCAGATGAGAGGAAAAACTCCCCACGGCTTGTGGACAACAATCTATATCATTTCTGCATATTTTCAGATAATGTTCTGGCAACATCTGTAGTTGTAAACTCAACTGTCTCCAATGCGGATCATCCTAAGCAATTAGTCTTTCACATTGTCACTAATGGAATCAATTATGGAGCAATGCAAGCATGGTTCCTAAATAATGACTTTAAAGGAGCCACCATAGAGGTACAAAACATTGAGGAGTTTCATTGGTTGAACGCATCTTATTCTCCTCTTTACAAGCAGCTCCTCAATCCTGATTCACAAACCTTCTACTTTGGAGCATATCAAGATTTAAATGATGAACCCAAAATGCGGAatcccaactcgaggtttgatccgcaggcatgtgcttgggcatttggtATGAACATTTTTGACTTGGTTGCATGGCGGAAGGCAAACGTGACCACAAGATATCACTATTGGCAAGAGCAGAATGCTGATGGGACTCTCTGGAAGCTGGGGACACTTCCTCCTGCTCTTCTTTGTTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTAAATATTGACAACCGCCTCATTGAAAGTGCAGCAGTTATTCACTTCAATGGGAACATGAAGCCATGGTTGAAGTTAGCTATAGGAAGGTATAAGCCACTATGGGACAAGTACGTAAATCAAAGTCACCCTCATCTTCAAGGTGAAGAGATGTGGGAGAATCCATTTTTGGCCGGTGGGGCTATCTTTTCCCCTTCTGCAAGTGGTAGAATGATTGTTCTTTAG 1458 0.4102 MRRRAAEYRRPARRRFSYWIWLLLAFSSILALLLFLLQHNHHHQDPLHHPLSERNARVEHFAKEGFNFTEEILSVTSFSRQLAEQMILAKVYVVIAKEHNNLHLAWQLSSKIRSCQLLLSKAAMTGEPVTLEEAEPIIKSLSFLMFKAQDIHYDIATTIVTMKSHIQALEERANAAIVQSTVFGQIAAEAVPKSLHCLNVKLMSDWLKMPSLQEFSDERKNSPRLVDNNLYHFCIFSDNVLATSVVVNSTVSNADHPKQLVFHIVTNGINYGAMQAWFLNNDFKGATIEVQNIEEFHWLNASYSPLYKQLLNPDSQTFYFGAYQDLNDEPKMRNPNSRFDPQACAWAFGMNIFDLVAWRKANVTTRYHYWQEQNADGTLWKLGTLPPALLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWDKYVNQSHPHLQGEEMWENPFLAGGAIFSPSASGRMIVL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00176 485 PANTHER HEXOSYLTRANSFERASE 3 336 - -
Gma05g00176 485 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 337 459 IPR029993 GO:0047262
Gma05g00176 485 Pfam Glycosyl transferase family 8 309 437 IPR002495 GO:0016757
Gma05g00176 485 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 457 IPR029044 -
Gma05g00176 485 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 302 456 IPR029044 -
Gma05g00176 485 PANTHER HEXOSYLTRANSFERASE 337 459 - -
Gma05g00176 485 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 336 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00176 Gma-Chr5 1660590 1663699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00176 337 458 Glycosyltransferase AT2G20810 68.033 7.72e-57 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00176 K13648 - gmx:100798878 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00176 05 1660590 1663699 Gma05g00176 05 1660590 1663699 ECH
Gma17g00768 17 6465850 6469326 Gma05g00176 05 1660590 1663699 GST
Gma05g00176 05 1660590 1663699 Gma04g01534 04 41399893 41403369 PCT
Gma04g01534 04 41399893 41403369 Gma05g00176 05 1660590 1663699 PCT