Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00754 ATGAGGTGGGAAAAGGTTGAGGTGAAGGCGATAGGCACAACAACAGAGGGTGGTGGCGGTGGAGGGCCAGGGAAGAGGTGGGGTCACACCTGCAACGCCGTCAAAGGTGGCAGACTTGTCTATGTCTTCGGTGGTTACGGCAAAGATAACTGCCAGACCAACCAAGTTCATGTCTTCGACACTGTGAAACAGACATGGAGCCAACCTGCTTTAAAAGGCTCCCCACCAACTCCTAGGGACAGCCATACAAGCACAGCCGTTGGTGATAATTTGTTTGTGTTTGGGGGTACAGATGGAATGAACCCTCTCAAGGATTTGCACATATTAGACACTTCTTTGCAAACATGGGTTTCTCCAACCATAAGAGGAGAAGGGCCACCAGCACGTGAGGGTCATAGTGCAGCAGTTGTTGGCAAACGGCTATTCATCTTTGGAGGTTGTGGAAAATCTGCAGATAATAATAATGAGCTCTACTACAATGATCTTTACATATTAAATGCAGAGACATTTGTTTGGAAGTGTGCTACAACATCAGGCACTCCACCATCTCCTCGTGATAGCCACAGTTGTTCATCTTGGAGAAACAAAATTATTGTGATAGGAGGTGAAGATGGGCATGATTATTATTTGTCTGACGTCCATATTCTTGATACTGATACTCTAATTTGGAGGGAGCTGAGTACATCAGGCCAATTGTTGCCACCTCGAGCTGGTCATTCCACTGTTTCTTTTGGCAAGAACTTGTTTGTTTTTGGTGGATTTACAGATGCCCAAAACCTCTATAATGACCTTTATATGCTCGATATTGATACTGGTGTTTGGACAAATGTTACAACTGCAACCAATGGTCCTTCTGCTAGATTTTCTGTGGCTGGTGACTGTTTAGACCCTTTTAGGAGTGGTGTTCTTATATTCATCGGTGGTTGTAATAAAAGTCTTGAGGCCCTGGATGATATGTATTACCTATATACAGGGATTGCTCGAGAAAGTGAACAGAGACCAGAAAAATTATCTTTAAAGAAGCAATTGAAACTGAAATGTCTAGAACAAAATCCCAATCCTAGCCAAAATCAAGTTCTAGTTAGATATGGAGTGGGTTCTGATGTGGGACAGACCATGAAAGTGTTGAATTATAGCCAACAAAGTAGACTAAATATCCCAGTAAACCAATCCCTACCTCCTGGTAAGAAAATGTTTGAAGCCAAGGTTACTGAAAACATCTCAGAAGGATATACTATTGAAACTGTTATTGATGGAAAACCTCTTCGTGGAATTCTGTTTTTAAACAAGCCTATCTCTCTGTACACAGATGCTCATACTTGCAGTAGCAGGAAAAGGACTGTTGGTGAAATTGATAGTGTTGTCTCGAATGGTATACACCCTAACCAATTTAAGACTCCTAAAGTGGTCAAGCAAAATCAAATGGAAAACCGAGAAGCATCTCGTGGAGACAGTTCAGAATCTCATGAACACCGCACTGAATCCATTGCCGTGCTTATGTCAAGTAACCCAATGACTGCCAATCCTTCTGATACCCATAAGGTTTCTGCCAACCCAGAAGCAGAAGCTGCTGCTTTGAATCAAAATGATGAAAAACATGAAACACCCAAATCCTTAATTGGAAACTTGACAAATGATGGAGCGAATGATGTGACAAGTTCTAAAGGTGAGGTGCAAACTAATGATCAAACAAATATGCTAATTTCCAACTTTGAAGTTCCAAGACGCGATAAAACAAGTGATGCTCCAAACTACAACACTGAATTTCTGAAACCTGCTGCAGCTGAGAGTGCTTTGCATCTGTCAAATCAAGGTGCAGTGGTGGATTCCGCAACTCCACAACTCCAACGGCAAGAGAATGCAGTGAATCAGCAAAATTAA 1881 0.4216 MRWEKVEVKAIGTTTEGGGGGGPGKRWGHTCNAVKGGRLVYVFGGYGKDNCQTNQVHVFDTVKQTWSQPALKGSPPTPRDSHTSTAVGDNLFVFGGTDGMNPLKDLHILDTSLQTWVSPTIRGEGPPAREGHSAAVVGKRLFIFGGCGKSADNNNELYYNDLYILNAETFVWKCATTSGTPPSPRDSHSCSSWRNKIIVIGGEDGHDYYLSDVHILDTDTLIWRELSTSGQLLPPRAGHSTVSFGKNLFVFGGFTDAQNLYNDLYMLDIDTGVWTNVTTATNGPSARFSVAGDCLDPFRSGVLIFIGGCNKSLEALDDMYYLYTGIARESEQRPEKLSLKKQLKLKCLEQNPNPSQNQVLVRYGVGSDVGQTMKVLNYSQQSRLNIPVNQSLPPGKKMFEAKVTENISEGYTIETVIDGKPLRGILFLNKPISLYTDAHTCSSRKRTVGEIDSVVSNGIHPNQFKTPKVVKQNQMENREASRGDSSESHEHRTESIAVLMSSNPMTANPSDTHKVSANPEAEAAALNQNDEKHETPKSLIGNLTNDGANDVTSSKGEVQTNDQTNMLISNFEVPRRDKTSDAPNYNTEFLKPAAAESALHLSNQGAVVDSATPQLQRQENAVNQQN 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00754 626 Pfam Kelch motif 126 170 - -
Gma17g00754 626 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 1 552 - -
Gma17g00754 626 Gene3D - 150 399 IPR015915 GO:0005515
Gma17g00754 626 PANTHER KELCH REPEAT DOMAIN 1 552 - -
Gma17g00754 626 MobiDBLite consensus disorder prediction 459 493 - -
Gma17g00754 626 MobiDBLite consensus disorder prediction 526 557 - -
Gma17g00754 626 Pfam Galactose oxidase, central domain 184 229 - -
Gma17g00754 626 Pfam Galactose oxidase, central domain 235 284 - -
Gma17g00754 626 MobiDBLite consensus disorder prediction 538 557 - -
Gma17g00754 626 MobiDBLite consensus disorder prediction 459 474 - -
Gma17g00754 626 SUPERFAMILY Galactose oxidase, central domain 180 316 IPR011043 -
Gma17g00754 626 SUPERFAMILY Galactose oxidase, central domain 20 227 IPR011043 -
Gma17g00754 626 Pfam Galactose oxidase, central domain 38 86 - -
Gma17g00754 626 MobiDBLite consensus disorder prediction 475 493 - -
Gma17g00754 626 SMART kelc_smart 196 246 IPR006652 GO:0005515
Gma17g00754 626 SMART kelc_smart 90 139 IPR006652 GO:0005515
Gma17g00754 626 SMART kelc_smart 39 89 IPR006652 GO:0005515
Gma17g00754 626 SMART kelc_smart 247 293 IPR006652 GO:0005515
Gma17g00754 626 Gene3D - 1 149 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00754 Gma-Chr17 6340618 6348585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00754 53 312 Acyl Lipid Metabolism Gene Families AT3G05420 28.364 3.50e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00754 - - gmx:100803752 1234.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00754 17 6340618 6348585 Gma17g00754 17 6340618 6348585 ECH
Gma17g00754 17 6340618 6348585 Gma05g00190 05 1783231 1791076 GST
Gma17g00754 17 6340618 6348585 Gma04g01551 04 42011696 42018655 PCT
Gma04g01551 04 42011696 42018655 Gma17g00754 17 6340618 6348585 PCT