Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01551 ATGAGGTGGGAAAAGGTGAAGGGAATAGGAGGAGAAGAAGGGCCAGGGAAGAGGTGGGGCCACACGTGTAACGCGGTTAGAGATGGCAGATTCCTTTATCTCTTCGGCGGTTACGGCAAATTTAACTGTCAGACCAACCAAGTTCACGTCTTCGACACTCTGAAGCAGAGTTGGAGTGAACCAGCAATTAAGGGCCCCCCACCTACTCCTAGGGACAGCCATAGTTGCACTGTAATTGGTGATAGTCTGTTTGTGTTTGGGGGTACAGATGGGTCCAAGCTACTGAATGATTTGCACATACTAGATACTTCTTCACATACATGGGTTTTTCCAACTGTGAGAGGGGAAGCACCAGATGCACGTGAGGGTCATGATGCAGCACTTGTTGGCAAACGACTATTTATGTTTGGTGGTTGTGGGAGATCTGCTGATAACATTAATGAGGTGTACTACAATGACCTTTACATATTGAATACAGAATTGTTCGTTTGGAACCGTGCTACAACATCAGGCACTCCACCATCTCCTCGTGATGGCCATACTTGCTCATCTTGGAGAAACAAAATTATTGTGATAGGTGGGGAAGATGAAAATGATTCTTATCTGTCTGATGTCCACATCCTAGATACTGATACTCTAATCTGGAGTAAACTGTGTACGTCAGGCCAATTGTTGCCACCTCGAGCTGGTCATTCTACGGTTTCTTTTGGAAAGAACTTGTTTGTTTTTGGGGGCTTTACAGATGCTCAAAGCCTATACAACGACCTGTATATGCTCAACATTGAGACTTGTGTGTGGACGAAGGTGGCAATTACACCTAATGGTCCTTCTGCTAGATTTTCTGTTGCTGGTGACTGTTTAGACCCATATATGAGTGGTGTTCTTGTGTTTGTTGGTGGTTGTAATAGAAATCTGGAAGCCCTGGATGATATGCATTACCTATACACAGGGATTGCACGGGAAAGTGAACAGCGACCAAAGAAGTTATCCTTAAGGAAGCAATTGAAGCTGAAATGTCTAGAACAGAATCCCAATCTTGTCCAAAACCCAGTTCTGTGTGGATATGGAGTGGGTGCTGACAGTAACCAGCCCATGTCAATCTTGAACTATAGCCAACCAAGTAGACTATATATCCCAGTAAATCAACCCCTGCCTCCTGGAAAGAAAATGTTTCAAGCCAACGTTAAGGGAAAAAACTCAGCAGGATATACTATTGAAACCGTTATTGATGGAAAGCCTCTTCATGGAGTTCTGTTTAAAAACCAGCCAAACACTCTTATTCCAGTTCCTAATACTTCCAGTAGGAAAAGGACTTTTAGTGAAATTTTAAGTCCTGCTTCAAATGGTATACATTCACACAATGTAATGGCTTATAAGGTGCTCAGGCAGGACAGAATGCAAGATAAACAGGAATTACGGGGAGAGAGTTCAGAATCTCATGAACGCCATAAGGAAGCTGATACTATTGTTGTATCAAGTAACCCGACAACTGCTGCCAAGTCCATTAAGGTTTCTGTCAACCCAGAACCAGAAGCTGTTTCTATGGATCAAAATGGTGATGAAAAAAATGACACACCAAAATCCTTAATTGAGAGCTTGAAAAATGATGGATCCAATGATGTGACCAGTTCCAAAGGTGAAGTTCAAATTGGTGGTCAAATAAATGTGCCAGTTTCCAACTATGAAATTCCAAGACAAATGAGTGATGCACCAAACTGTAATGCTGATGTCCTGAAACCTGCAGCAGCTAAGAGTGCTGTGTGTCCACCAAATCAAGGTGTAACAGGGGATTGCACAACTCCAAGGACAGAAGGACACAATGAACAAGCAAAATTAACTTGA 1842 0.4278 MRWEKVKGIGGEEGPGKRWGHTCNAVRDGRFLYLFGGYGKFNCQTNQVHVFDTLKQSWSEPAIKGPPPTPRDSHSCTVIGDSLFVFGGTDGSKLLNDLHILDTSSHTWVFPTVRGEAPDAREGHDAALVGKRLFMFGGCGRSADNINEVYYNDLYILNTELFVWNRATTSGTPPSPRDGHTCSSWRNKIIVIGGEDENDSYLSDVHILDTDTLIWSKLCTSGQLLPPRAGHSTVSFGKNLFVFGGFTDAQSLYNDLYMLNIETCVWTKVAITPNGPSARFSVAGDCLDPYMSGVLVFVGGCNRNLEALDDMHYLYTGIARESEQRPKKLSLRKQLKLKCLEQNPNLVQNPVLCGYGVGADSNQPMSILNYSQPSRLYIPVNQPLPPGKKMFQANVKGKNSAGYTIETVIDGKPLHGVLFKNQPNTLIPVPNTSSRKRTFSEILSPASNGIHSHNVMAYKVLRQDRMQDKQELRGESSESHERHKEADTIVVSSNPTTAAKSIKVSVNPEPEAVSMDQNGDEKNDTPKSLIESLKNDGSNDVTSSKGEVQIGGQINVPVSNYEIPRQMSDAPNCNADVLKPAAAKSAVCPPNQGVTGDCTTPRTEGHNEQAKLT 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01551 613 MobiDBLite consensus disorder prediction 515 529 - -
Gma04g01551 613 MobiDBLite consensus disorder prediction 530 546 - -
Gma04g01551 613 MobiDBLite consensus disorder prediction 466 546 - -
Gma04g01551 613 SUPERFAMILY Galactose oxidase, central domain 14 303 IPR011043 -
Gma04g01551 613 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 12 470 - -
Gma04g01551 613 PANTHER KELCH REPEAT DOMAIN 12 470 - -
Gma04g01551 613 MobiDBLite consensus disorder prediction 586 613 - -
Gma04g01551 613 MobiDBLite consensus disorder prediction 489 503 - -
Gma04g01551 613 MobiDBLite consensus disorder prediction 466 488 - -
Gma04g01551 613 Gene3D - 1 142 IPR015915 GO:0005515
Gma04g01551 613 Gene3D - 143 363 IPR015915 GO:0005515
Gma04g01551 613 MobiDBLite consensus disorder prediction 592 607 - -
Gma04g01551 613 Pfam Galactose oxidase, central domain 18 68 - -
Gma04g01551 613 Pfam Galactose oxidase, central domain 70 112 - -
Gma04g01551 613 Pfam Galactose oxidase, central domain 176 222 - -
Gma04g01551 613 Pfam Galactose oxidase, central domain 227 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01551 Gma-Chr4 42011696 42018655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01551 108 314 Acyl Lipid Metabolism Gene Families AT3G05420 31.797 3.24e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01551 - - gmx:100785267 1264.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01551 04 42011696 42018655 Gma04g01551 04 42011696 42018655 ECH
Gma17g00754 17 6340618 6348585 Gma04g01551 04 42011696 42018655 PCT
Gma05g00190 05 1783231 1791076 Gma04g01551 04 42011696 42018655 PCT
Gma04g01551 04 42011696 42018655 Gma17g00754 17 6340618 6348585 PCT
Gma04g01551 04 42011696 42018655 Gma05g00190 05 1783231 1791076 PCT