Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00563 ATGGAGACAAAAATAGTGCTCGCAAGGCCATTCTCGCTAGAGAGCGAATCAGACCCAGATGCAAATTATAAAGCTCCAAATATTTTGCGGCGCATATTAAGTCTCTTCAGTAATGTGCGCCCAGGATCTGATGTCTCTTGCTTCAAGCTGCCACCTGTGTTCAACATGCCGAAGTCAGAGCTTCAGTGCTACGGGGAGTGTGTATATTCCACAGCGTTAGACATGCTAAGCAACATCAACAGAGGCAACACACCATTGGATAGACTCATATCTGTTGTTGCATGGAGCATTTCTACCGTACGCCCCCTATGGTTTGGTGTTGCTCCCTACAATCCCACTCTTGGTGAGACTCATCATGTTTCCAAAGGAAACCTCAATGTCTTACTCGAACAGGTTTCACATCACCCTCCGGTATCTGCTCTCCATGCCACCGATGACAAGGAAAACATAGAAATGATATGGTGCCACTCTACTGTTCCAAAATTCACAGGTACTTCAGTTGAAGCTCACGTGCATGGCAAACGGCAGCTGAAGCTCCACAATCATGGAGAGACCTATGAAATGAATGCTCCTAATCTCCTTATCAGAATTTTTCCAATCCCTGGGAATGATAATGTTGGCGATGTCAGTATCCGGTGCCTAGAAACTAACCTTGTGGCAGAATTAAGCTACATAAGCCAATCTTTCTTTCGGTTTGGGACAAATCGGAGACAGATTAAAGGAAAGATCATTGATTCATTGTCTGCCAAGCTTCTGTATAAAATTGAAGGTCATTGGGATAGTACTGTAACAGTGAAGAATACAGACAATGCAGAAGTAAGAGTGATATACGATGCAAATGAAGTTATTTCAGGACTCCAAGCTCCTATTGTCATGGATCCGGAGAGTGTGTGGCCAACAGAAACCACTCTTGTTTGGAGTGAGTTGAGCCAAGCCATCGTGAACAAAGACTGGGAAAAAGCAACAGAAGCAAAGAAAACAGTGGAGGAAAGACAAAGGGAGCTCCAAAGAGAAAGAGAGTCAAAAGGGAAAACTTGGATTCCTAAACACTTTAGAGTGTCTTATAGCAAAGAAGAGGGTTGGGACTGTTCACCAATTCAAAAGTCAGTCCCAAACGCCCCTATCGTCACCTTGTAA 1137 0.4398 METKIVLARPFSLESESDPDANYKAPNILRRILSLFSNVRPGSDVSCFKLPPVFNMPKSELQCYGECVYSTALDMLSNINRGNTPLDRLISVVAWSISTVRPLWFGVAPYNPTLGETHHVSKGNLNVLLEQVSHHPPVSALHATDDKENIEMIWCHSTVPKFTGTSVEAHVHGKRQLKLHNHGETYEMNAPNLLIRIFPIPGNDNVGDVSIRCLETNLVAELSYISQSFFRFGTNRRQIKGKIIDSLSAKLLYKIEGHWDSTVTVKNTDNAEVRVIYDANEVISGLQAPIVMDPESVWPTETTLVWSELSQAIVNKDWEKATEAKKTVEERQRELQRERESKGKTWIPKHFRVSYSKEEGWDCSPIQKSVPNAPIVTL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00563 378 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 376 IPR000648 GO:0008289
Gma17g00563 378 SUPERFAMILY Oxysterol-binding protein-like 31 363 IPR037239 -
Gma17g00563 378 Pfam Oxysterol-binding protein 35 362 IPR000648 GO:0008289
Gma17g00563 378 Coils Coil 318 341 - -
Gma17g00563 378 Gene3D - 298 372 - -
Gma17g00563 378 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 1 376 - -
Gma17g00563 378 Gene3D - 111 287 - -
Gma17g00563 378 ProSitePatterns Oxysterol-binding protein family signature. 130 140 IPR018494 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00563 Gma-Chr17 4649465 4653249 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00563 K22285 - gmx:100819769 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00563 17 4649465 4653249 Gma13g00802 13 22326849 22332175 GST
Gma17g00563 17 4649465 4653249 Gma15g01536 15 14463686 14480189 PCT
Gma17g00563 17 4649465 4653249 Gma09g00533 09 5532330 5538824 PCT
Gma15g01536 15 14463686 14480189 Gma17g00563 17 4649465 4653249 PCT
Gma09g00533 09 5532330 5538824 Gma17g00563 17 4649465 4653249 PCT