Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00533 ATGGTTAAGATGGAAGAAGAGAAGAAAGAAACAAAAGTGGTGCTCACAAGGCCACTAACAATAGGAAGGGAATCTGATTCAGACGCGTCTTATAAAGCCCCTAATCTTTTGCAACGAATACTCAGTTTATTCAACAATGTACGCCCAGGCTCTGATCTCACACGCTTCCAGTTGCCACCTCTGTTCAACTTACCAAAGTCACAACTTCAGTGCTATGGTGAATCAGTGTATTGCACAGGTTCGGACTTGCTAAGCATGTGCAACAATGGTCAGAGTCCACTTGATAGGTTCATATCTGTGGTAGCATGGTGCATATCTACCACTCGCCCTGTGACTTTTGGTGTTGCTCCTTATAATCCCATTCTTGGTGAGACACACCATGTTTCAAGGGGAAATCTTAATGTGTTATTGGAGCAGATTTCACATCACCCTCCAGTAACTGCTCTCCATGCAACAGATGAGAAGGAAAACATTGAAATGTTATGGTGCCAGCGACCTGATCCAAAGTTTAATGGCACATCAGTTGAAGCTAAAGTGCATGGAATACGCCAGTTGAAGCTCCTAAATCATGGTGAAACATATGAAATGAATTGTCCTCGCCTTTTACTTAGAATTCTTCCAGTTCCTGGTGCTGATTGGGCTGGTACAGTTAATATACGGTGCCTAGAGACAGGTCTAGTAGCTGAATTATCCTACAGATCAAGTTCTTTTCTAGGAATTGGGGGGAATCATAGAGTGATCAAAGGGAAGATCCTTGACTCTTCATCATTGAAAGTTCTATATGAAGTTGATGGTCATTGGGATAGGACCGTAAAAGTGAAGGACACAAATAATGGGAAAGTAAGAGTGATATATGATGCAAAGGAAGTTATGTCAGGTCTCGAAACTCCTATACTCAAGGACATAGAGGGTGTGTGGCAAACAGAATCAGCTCATGTTTGGGGTGAATTAAACCAAGCCATTGTGAGCAAAGACTGGGAGAAAGCAAGAGAAGCAAAGCTAAAAGTTGAGGAAAGACAAAGGGAGCTTGTGAGAGAAAGAGAATCAAAAGGAGAAACATGGATTTCTAAGCATTTTGTAGTTTCTAACAACAAAGAAGGGTGGCAATGTTCACCTATTCATAAGAGTGTACCTGCGGCCCCCATCACAGCCCTATAA 1158 0.4214 MVKMEEEKKETKVVLTRPLTIGRESDSDASYKAPNLLQRILSLFNNVRPGSDLTRFQLPPLFNLPKSQLQCYGESVYCTGSDLLSMCNNGQSPLDRFISVVAWCISTTRPVTFGVAPYNPILGETHHVSRGNLNVLLEQISHHPPVTALHATDEKENIEMLWCQRPDPKFNGTSVEAKVHGIRQLKLLNHGETYEMNCPRLLLRILPVPGADWAGTVNIRCLETGLVAELSYRSSSFLGIGGNHRVIKGKILDSSSLKVLYEVDGHWDRTVKVKDTNNGKVRVIYDAKEVMSGLETPILKDIEGVWQTESAHVWGELNQAIVSKDWEKAREAKLKVEERQRELVRERESKGETWISKHFVVSNNKEGWQCSPIHKSVPAAPITAL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00533 385 ProSitePatterns Oxysterol-binding protein family signature. 138 148 IPR018494 -
Gma09g00533 385 Coils Coil 329 349 - -
Gma09g00533 385 Gene3D - 122 303 - -
Gma09g00533 385 Gene3D - 306 379 - -
Gma09g00533 385 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 7 383 IPR000648 GO:0008289
Gma09g00533 385 SUPERFAMILY Oxysterol-binding protein-like 38 370 IPR037239 -
Gma09g00533 385 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 7 383 - -
Gma09g00533 385 Pfam Oxysterol-binding protein 44 369 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00533 Gma-Chr9 5532330 5538824 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00533 K22285 - gmx:100813724 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00533 09 5532330 5538824 Gma09g00533 09 5532330 5538824 ECH
Gma15g01536 15 14463686 14480189 Gma09g00533 09 5532330 5538824 GST
Gma17g00563 17 4649465 4653249 Gma09g00533 09 5532330 5538824 PCT
Gma13g00802 13 22326849 22332175 Gma09g00533 09 5532330 5538824 PCT
Gma09g00533 09 5532330 5538824 Gma17g00563 17 4649465 4653249 PCT
Gma09g00533 09 5532330 5538824 Gma13g00802 13 22326849 22332175 PCT