Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00802 ATGAAGGTAACCAAAGGGAAGGAAACTAAAATTGTTCTGACAAAACCCTTCCAATTGGAAGGTGAATCAGATTTAGAACCGTCTTATAGAGCTCCCAATCTCCTACATCGCTTGTTAAGTTTACTCAAGAACGTGCGGCCAGGATCAGATCTCACACACTTCCAACTGCCAGCTGTGTTTAACTTCCCAAAATCTCAACTTCAATGCTATGGTGAATCAGTGTACTGCACATCTTCAAACTTGCTGAGCAAATGCAACAATGGGCAGAGTCCACTGGACAGGTTCACATCAGTAGTAGCATGGAGCATATCTACCACACGCCCCACATCTTTTGGTGTTGCTCCTTATAATCCCACTCTTGGAGAGACCCACCATGTTTCCAAGGGCAATCTCAACGTCCTAGTTGAGCAGGTATCAGTCAACCCTCCAGTATCTGCCCTCCATGCAACAGATGAGAAGGAAAACATTGAGATGATATGGTCCCAGCAACCTGTTCCAAAGTTTCGGGGTACATCTATTGAAGCTCAAGTGCATGGTAAACGTCAGCTGAAGCTCCTAAATCATGGAGAAACATATGAAATGAATTGTCCTCACCTTTCAATTAGAATTCTTCCGGTTCCTGGGATTGATTGGGTTGGCAATGTTAATATAAGGTGCCCAGAGACAGGTCTGGTAGCTGAAATATCATACAGATCAAGCCATTCTTTTCTAGGATTTGGGGGAAGTCGTAAATTTATCAAAGGGAAAATCCTTGACTCATCATTATTCAAAGTTCTCTATGAAGTTGATGGTCATTGGGATAAGACAGTTAAAGTGAAGGATACAAATAGTGGAGAAGTGAGAGTGATATATGATGCAAAAGAAGTTATTTCAGGGCTCAAAACTCCTATTATCAAGGATGCGGAGAGTGTGTGGCCAACCGAATCAGCCCTTGTTTGGAGTGAGTTGAGCCAAGCCATTATGAACAAAGATTGGGAAAGAGCAAGAGAAGCAAAACAAGATGTGGAAGAAAGACAGAGGAAGGTGTTGAGAGACAGAGCCATGAAAGGAGAAACTTGGTTTCCTAAGAATTTTAGGGTGTCCTACGGTAAAGACACGTGGGAATGGGACTGTTCACCAACTCATAAATGGGTCCCTGAGGCCCCCATCATAGCTCAATAA 1161 0.4307 MKVTKGKETKIVLTKPFQLEGESDLEPSYRAPNLLHRLLSLLKNVRPGSDLTHFQLPAVFNFPKSQLQCYGESVYCTSSNLLSKCNNGQSPLDRFTSVVAWSISTTRPTSFGVAPYNPTLGETHHVSKGNLNVLVEQVSVNPPVSALHATDEKENIEMIWSQQPVPKFRGTSIEAQVHGKRQLKLLNHGETYEMNCPHLSIRILPVPGIDWVGNVNIRCPETGLVAEISYRSSHSFLGFGGSRKFIKGKILDSSLFKVLYEVDGHWDKTVKVKDTNSGEVRVIYDAKEVISGLKTPIIKDAESVWPTESALVWSELSQAIMNKDWERAREAKQDVEERQRKVLRDRAMKGETWFPKNFRVSYGKDTWEWDCSPTHKWVPEAPIIAQ 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00802 386 Pfam Oxysterol-binding protein 40 315 IPR000648 GO:0008289
Gma13g00802 386 Gene3D - 302 350 - -
Gma13g00802 386 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 384 IPR000648 GO:0008289
Gma13g00802 386 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 1 384 - -
Gma13g00802 386 Gene3D - 117 295 - -
Gma13g00802 386 SUPERFAMILY Oxysterol-binding protein-like 37 370 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00802 Gma-Chr13 22326849 22332175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00802 K22285 - gmx:100813302 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00802 13 22326849 22332175 Gma13g00802 13 22326849 22332175 ECH
Gma17g00563 17 4649465 4653249 Gma13g00802 13 22326849 22332175 GST
Gma13g00802 13 22326849 22332175 Gma15g01536 15 14463686 14480189 PCT
Gma13g00802 13 22326849 22332175 Gma09g00533 09 5532330 5538824 PCT
Gma15g01536 15 14463686 14480189 Gma13g00802 13 22326849 22332175 PCT
Gma09g00533 09 5532330 5538824 Gma13g00802 13 22326849 22332175 PCT