Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00520 ATGGGTTCACGGGTTCTAATCGAGAATTTACCAAGGGGGAATTTTTGTACCCTGCTGTTAGTTTTGTGGGTTTGTGCAGTCACAGCCTCTGTGACTTATGATCACAAAGCCATTGTTGTTAATGGCCAGAGAAGAATTTTGATCTCTGGTTCCATTCACTACCCAAGAAGCACACCTGAGGCAAGTACTTTTAACCTTATTCAAAAGGCCAAAGATGGAGGCTTAGATGTTATCCAAACCTATGTGTTTTGGAATGGACATGAGCCTTCTCCCGGAAAGTATTATTTCGAGGATAGGTACGACTTGGTTAAGTTCATCAAGCTGGTACAGCAAGCTGGTCTCTATGTTCATCTCCGCATTGGTCCCTACATATGTGCTGAATGGAACTTTGGGGGGTTTCCTGTTTGGCTCAAGTATGTTCCGGGTATTGCTTTCAGAACAGACAATGAACCTTTCAAGGCTGCAATGCAAAAATTTACTGAGAAGATTGTCAGCATTATGAAGGAGGAGAAATTGTTCCAGACGCAGGGAGAAAACGAATATGGACCAGTGGAGTGGGAAATTGGTGCCCCTGGGAAAGCTTATACCAAATGGTTTTCTCAAATGGCTGTGGGTTTAGATACTGGTGTCCCCTGGATTATGTGCAAGCAACAAGATACTCCGGATCCTCTTATTGACACCTGCAATGGATACTACTGCGAAAACTTTACTCCCAACAAGAAATACAAACCCAAAATGTGGACAGAGAACTGGACTGGCTGGTACACTGAGTTTGGAGGCGCGGTCCCTCGTAGACCTGCAGAAGACATGGCATTCTCAGTTGCAAGATTCGTACAGAATGGTGGTTCATTTGTTAATTACTATATGTACCATGGAGGAACTAACTTTGATCGGACATCCAGTGGCCTCTTCATTGCCACCAGCTATGACTATGACGGTCCTATTGATGAATACGGACTTCTAAATGAACCAAAATGGGGGCATCTTAGAGATTTGCATAAAGCAATAAAGCTATGTGAGCCAGCTTTAGTGTCTGTAGATCCAACAGTGACATGGCCAGGAAATAACCTTGAGGTACATGTGTTCAAGACTTCTGGTGCTTGTGCTGCATTCCTTGCAAACTATGACACCAAATCTTCCGCATCAGTTAAATTTGGAAATGGACAATATGACCTACCACCATGGTCTATCAGCATCCTTCCTGATTGCAAAACTGCAGTTTTCAACACTGCGAGGCTTGGTGCTCAAAGCTCTCTGATGAAGATGACTGCCGTGAACAGTGCATTTGATTGGCAGTCATACAATGAAGAGCCTGCATCATCCAATGAGGATGATTCTTTGACAGCATATGCACTCTGGGAGCAGATTAATGTCACCCGAGATTCTACAGATTATTTGTGGTATATGACAGATGTCAACATTGATGCAAATGAAGGTTTTATAAAGAATGGACAATCTCCTGTTCTTACCGTAATGTCAGCAGGCCATGTTTTGCATGTTTTAATTAATGATCAACTTTCAGGTACCGTGTACGGGGGACTGGACTCTCATAAGTTAACATTTAGTGACAGTGTTAAGCTGAGGGTTGGCAATAACAAGATTTCTTTACTAAGTATTGCCGTGGGTCTCCCGAATGTTGGGCCACACTTTGAGACATGGAATGCTGGGGTGTTAGGTCCAGTCACACTTAAGGGTCTAAATGAGGGGACTAGAGACTTGTCTAAACAGAAATGGTCTTACAAGATTGGTCTCAAGGGTGAAGCCTTAAACCTTAACACTGTCAGTGGTAGTTCCTCCGTGGAATGGGTACAAGGATCATTATTGGCTAAACAGCAACCTTTGGCATGGTACAAGACAACTTTTAGCACACCAGCAGGCAACGATCCGTTAGCTCTGGACATGATTAGCATGGGAAAGGGTCAGGCATGGATAAACGGTCGAAGCATTGGACGCCATTGGCCTGGATATATAGCACGCGGTAACTGTGGGGATTGTTATTATGCTGGAACTTACACTGATAAAAAATGCCGGACAAATTGTGGAGAACCCTCCCAGAGATGGTACCATATTCCTCGGTCGTGGCTGAACCCAAGTGGGAACTATCTGGTTGTGTTTGAAGAATGGGGAGGTGATCCTACTGGAATTACTTTGGTGAAAAGAAGAACAGCAAGTGTGTGTGCTGATATATACCAAGGGCAACCAACTCTTAAGAACAGACAGATGCTAGACTCTGGCAAAGTTGTTAGACCCAAGGCTCACTTGTGGTGTCCACCTGGGAAAAACATCTCTCAGATTAAATTTGCTAGTTATGGATTGCCACAGGGAACTTGTGGAAACTTTAGAGAAGGAAGTTGTCATGCTCACAAATCATATGATGCTCCTCAAAAGAACTGCATTGGCAAGCAATCTTGCTTGGTGACTGTAGCTCCTGAAGTTTTTGGGGGAGACCCGTGTCCGGGAATTGCAAAGAAGCTCTCACTTGAAGCACTATGCGGATAA 2499 0.4398 MGSRVLIENLPRGNFCTLLLVLWVCAVTASVTYDHKAIVVNGQRRILISGSIHYPRSTPEASTFNLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEDRYDLVKFIKLVQQAGLYVHLRIGPYICAEWNFGGFPVWLKYVPGIAFRTDNEPFKAAMQKFTEKIVSIMKEEKLFQTQGENEYGPVEWEIGAPGKAYTKWFSQMAVGLDTGVPWIMCKQQDTPDPLIDTCNGYYCENFTPNKKYKPKMWTENWTGWYTEFGGAVPRRPAEDMAFSVARFVQNGGSFVNYYMYHGGTNFDRTSSGLFIATSYDYDGPIDEYGLLNEPKWGHLRDLHKAIKLCEPALVSVDPTVTWPGNNLEVHVFKTSGACAAFLANYDTKSSASVKFGNGQYDLPPWSISILPDCKTAVFNTARLGAQSSLMKMTAVNSAFDWQSYNEEPASSNEDDSLTAYALWEQINVTRDSTDYLWYMTDVNIDANEGFIKNGQSPVLTVMSAGHVLHVLINDQLSGTVYGGLDSHKLTFSDSVKLRVGNNKISLLSIAVGLPNVGPHFETWNAGVLGPVTLKGLNEGTRDLSKQKWSYKIGLKGEALNLNTVSGSSSVEWVQGSLLAKQQPLAWYKTTFSTPAGNDPLALDMISMGKGQAWINGRSIGRHWPGYIARGNCGDCYYAGTYTDKKCRTNCGEPSQRWYHIPRSWLNPSGNYLVVFEEWGGDPTGITLVKRRTASVCADIYQGQPTLKNRQMLDSGKVVRPKAHLWCPPGKNISQIKFASYGLPQGTCGNFREGSCHAHKSYDAPQKNCIGKQSCLVTVAPEVFGGDPCPGIAKKLSLEALCG 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00520 832 Pfam Glycosyl hydrolases family 35 38 335 IPR031330 -
Gma17g00520 832 Gene3D - 585 726 - -
Gma17g00520 832 SUPERFAMILY Galactose-binding domain-like 397 567 IPR008979 -
Gma17g00520 832 Gene3D - 746 832 IPR043159 -
Gma17g00520 832 Pfam Galactose binding lectin domain 754 831 IPR000922 GO:0030246
Gma17g00520 832 ProSiteProfiles SUEL-type lectin domain profile. 746 832 IPR000922 GO:0030246
Gma17g00520 832 PANTHER BETA-GALACTOSIDASE 17 720 - -
Gma17g00520 832 Pfam Beta-sandwich domain in beta galactosidase 343 412 IPR041392 -
Gma17g00520 832 Gene3D Glycosidases 24 339 - -
Gma17g00520 832 PRINTS Glycosyl hydrolase family 35 signature 246 261 IPR001944 GO:0004553|GO:0005975
Gma17g00520 832 PRINTS Glycosyl hydrolase family 35 signature 303 319 IPR001944 GO:0004553|GO:0005975
Gma17g00520 832 PRINTS Glycosyl hydrolase family 35 signature 612 626 IPR001944 GO:0004553|GO:0005975
Gma17g00520 832 PRINTS Glycosyl hydrolase family 35 signature 639 655 IPR001944 GO:0004553|GO:0005975
Gma17g00520 832 PRINTS Glycosyl hydrolase family 35 signature 283 298 IPR001944 GO:0004553|GO:0005975
Gma17g00520 832 PRINTS Glycosyl hydrolase family 35 signature 41 58 IPR001944 GO:0004553|GO:0005975
Gma17g00520 832 PRINTS Glycosyl hydrolase family 35 signature 63 81 IPR001944 GO:0004553|GO:0005975
Gma17g00520 832 PRINTS Glycosyl hydrolase family 35 signature 118 137 IPR001944 GO:0004553|GO:0005975
Gma17g00520 832 SUPERFAMILY Galactose-binding domain-like 577 734 IPR008979 -
Gma17g00520 832 PANTHER BETA-GALACTOSIDASE RELATED 17 720 IPR001944 GO:0004553|GO:0005975
Gma17g00520 832 SUPERFAMILY (Trans)glycosidases 30 340 IPR017853 -
Gma17g00520 832 Gene3D - 429 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00520 Gma-Chr17 4271325 4276699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00520 18 831 Glycoside Hydrolase AT3G13750 69.324 0.0 1206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00520 - - gmx:100810170 1731.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00520 17 4271325 4276699 Gma17g00520 17 4271325 4276699 ECH
Gma17g00520 17 4271325 4276699 Gma13g00839 13 22666274 22671833 GST
Gma17g00520 17 4271325 4276699 Gma15g01582 15 15382350 15387544 PCT
Gma17g00520 17 4271325 4276699 Gma09g00571 09 6136398 6142843 PCT
Gma15g01582 15 15382350 15387544 Gma17g00520 17 4271325 4276699 PCT
Gma09g00571 09 6136398 6142843 Gma17g00520 17 4271325 4276699 PCT