Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00571 ATGGGGAAGAGAGAGTTTAATGGGGTGGTGTTGATGATGCTGTGTTTGTGGGTTTGTGGTGTCACAGCCTCTGTGACTTATGACCACAAAGCCATTGTGGTTGATGGCAAGAGAAGAATTTTGATCTCTGGCTCCATTCATTATCCTAGAAGCACACCTCAAATGTGGCCAGACCTTATTCAAAAGGCCAAAGATGGAGGCCTTGATGTCATTCAGACCTATGTGTTTTGGAATGGCCATGAACCTTCTCCTGGACAATACTATTTCGAAGATAGGTTCGACTTGGTTAAATTCGTGAAGCTCGCGCAGCAAGCAGGCCTCTATGTTCATCTCCGTATTGGTCCCTACATATGTGCTGAATGGAACTTGGGGGGATTTCCTGTCTGGCTCAAGTATGTTCCAGGCATTGCTTTCAGAACCGACAATGAGCCGTTCAAGGCTGCAATGCAAAAATTCACTGCAAAGATTGTCAGCTTGATGAAAGAAAATAGGTTGTTTCAATCCCAGGGTGGTCCAATAATTTTGTCACAGATTGAGAACGAGTATGGACCAGTGGAATGGGAAATTGGTGCTCCTGGAAAAGCTTATACGAAATGGGCTGCACAAATGGCTGTTGGTCTAGACACTGGTGTTCCATGGGTAATGTGCAAGCAAGAAGATGCTCCTGATCCTGTTATTGACACCTGCAACGGATTCTACTGTGAAAACTTCAAGCCCAACAAGAACACCAAACCCAAAATGTGGACTGAGAATTGGACTGGCTGGTACACTGATTTTGGCGGTGCAGTCCCTCGTAGACCAGCAGAAGACTTGGCGTTCTCAGTTGCAAGATTCATACAGAATGGTGGTTCATTCGTTAACTACTATATGTACCATGGAGGAACGAACTTTGGCCGGACATCAGGTGGCCTCTTCATTGCCACTAGCTATGACTATGATGCGCCGCTTGATGAATACGGACTTGAAAATGAACCAAAGTATGAGCATTTGAGAGCTTTGCATAAAGCAATAAAACAAAGTGAACCTGCTTTAGTGGCTACAGATCCCAAAGTGCAATCGCTTGGATATAACCTTGAGGCCCACGTGTTCTCGGCCCCAGGTGCTTGTGCTGCATTCATTGCTAATTATGACACCAAATCTTATGCAAAAGCTAAATTTGGAAATGGGCAATATGATCTACCGCCTTGGTCTATCAGTATTCTTCCTGATTGCAAAACTGTTGTTTACAACACAGCAAAGGTTGGTTACGGCTGGCTGAAAAAGATGACTCCTGTAAACAGTGCATTTGCTTGGCAGTCATACAATGAAGAACCTGCCTCATCCAGTCAAGCTGATTCCATTGCAGCATATGCACTTTGGGAGCAGGTCAACGTGACCCGCGATTCTTCAGATTATTTGTGGTATATGACAGATGTCAACGTTAATGCTAATGAAGGATTTCTAAAGAATGGACAATCTCCTCTTCTAACTGTAATGTCAGCTGGCCATGTTCTCCATGTGTTCATTAACGGTCAACTTGCAGGAACTGTGTGGGGGGGATTGGGAAATCCTAAATTGACATTTAGTGACAATGTGAAGCTGAGGGCTGGCAATAACAAGCTTTCTTTACTTAGCGTTGCAGTTGGTCTCCCGAATGTTGGTGTGCACTTTGAAACATGGAATGCGGGGGTGTTAGGCCCAGTCACTCTGAAGGGTCTAAATGAGGGGACTCGAGACTTGTCCCGGCAGAAATGGTCTTACAAGGTTGGACTGAAAGGTGAATCCTTGAGCCTTCACACCGAAAGTGGGAGTAGCTCTGTGGAATGGATACAAGGATCATTAGTGGCTAAAAAACAACCTTTGACATGGTACAAGACAACTTTTAGCGCACCGGCCGGCAATGATCCATTGGCTCTAGATTTGGGAAGCATGGGAAAGGGTGAAGTGTGGGTAAACGGTCGAAGCATTGGTCGCCATTGGCCTGGATATATAGCACATGGTAGTTGCAATGCTTGTAATTATGCTGGATATTATACTGATACAAAATGCCGGACGAATTGTGGACAACCTTCTCAGAGATGGTATCATGTTCCTCGCTCATGGCTGAGCTCAGGTGGTAACTCCTTGGTTGTGTTTGAAGAATGGGGAGGTGACCCTAATGGAATTGCTTTGGTGAAAAGAACATGA 2166 0.4506 MGKREFNGVVLMMLCLWVCGVTASVTYDHKAIVVDGKRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGQYYFEDRFDLVKFVKLAQQAGLYVHLRIGPYICAEWNLGGFPVWLKYVPGIAFRTDNEPFKAAMQKFTAKIVSLMKENRLFQSQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAAQMAVGLDTGVPWVMCKQEDAPDPVIDTCNGFYCENFKPNKNTKPKMWTENWTGWYTDFGGAVPRRPAEDLAFSVARFIQNGGSFVNYYMYHGGTNFGRTSGGLFIATSYDYDAPLDEYGLENEPKYEHLRALHKAIKQSEPALVATDPKVQSLGYNLEAHVFSAPGACAAFIANYDTKSYAKAKFGNGQYDLPPWSISILPDCKTVVYNTAKVGYGWLKKMTPVNSAFAWQSYNEEPASSSQADSIAAYALWEQVNVTRDSSDYLWYMTDVNVNANEGFLKNGQSPLLTVMSAGHVLHVFINGQLAGTVWGGLGNPKLTFSDNVKLRAGNNKLSLLSVAVGLPNVGVHFETWNAGVLGPVTLKGLNEGTRDLSRQKWSYKVGLKGESLSLHTESGSSSVEWIQGSLVAKKQPLTWYKTTFSAPAGNDPLALDLGSMGKGEVWVNGRSIGRHWPGYIAHGSCNACNYAGYYTDTKCRTNCGQPSQRWYHVPRSWLSSGGNSLVVFEEWGGDPNGIALVKRT 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00571 721 Gene3D Glycosidases 19 342 - -
Gma09g00571 721 Gene3D - 431 575 - -
Gma09g00571 721 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 170 182 IPR019801 GO:0004553|GO:0005975
Gma09g00571 721 PANTHER BETA-GALACTOSIDASE 5 721 - -
Gma09g00571 721 PANTHER BETA-GALACTOSIDASE RELATED 5 721 IPR001944 GO:0004553|GO:0005975
Gma09g00571 721 Pfam Beta-sandwich domain in beta galactosidase 344 414 IPR041392 -
Gma09g00571 721 SUPERFAMILY Galactose-binding domain-like 577 716 IPR008979 -
Gma09g00571 721 PRINTS Glycosyl hydrolase family 35 signature 35 52 IPR001944 GO:0004553|GO:0005975
Gma09g00571 721 PRINTS Glycosyl hydrolase family 35 signature 56 74 IPR001944 GO:0004553|GO:0005975
Gma09g00571 721 PRINTS Glycosyl hydrolase family 35 signature 111 130 IPR001944 GO:0004553|GO:0005975
Gma09g00571 721 PRINTS Glycosyl hydrolase family 35 signature 168 183 IPR001944 GO:0004553|GO:0005975
Gma09g00571 721 PRINTS Glycosyl hydrolase family 35 signature 247 262 IPR001944 GO:0004553|GO:0005975
Gma09g00571 721 PRINTS Glycosyl hydrolase family 35 signature 284 299 IPR001944 GO:0004553|GO:0005975
Gma09g00571 721 PRINTS Glycosyl hydrolase family 35 signature 304 320 IPR001944 GO:0004553|GO:0005975
Gma09g00571 721 PRINTS Glycosyl hydrolase family 35 signature 612 626 IPR001944 GO:0004553|GO:0005975
Gma09g00571 721 PRINTS Glycosyl hydrolase family 35 signature 639 655 IPR001944 GO:0004553|GO:0005975
Gma09g00571 721 Pfam Glycosyl hydrolases family 35 32 336 IPR031330 -
Gma09g00571 721 Gene3D - 585 721 - -
Gma09g00571 721 SUPERFAMILY (Trans)glycosidases 25 339 IPR017853 -
Gma09g00571 721 SUPERFAMILY Galactose-binding domain-like 398 567 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00571 Gma-Chr9 6136398 6142843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00571 4 721 Glycoside Hydrolase AT5G56870 70.319 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00571 - - gmx:100792629 1515.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00571 09 6136398 6142843 Gma09g00571 09 6136398 6142843 ECH
Gma15g01582 15 15382350 15387544 Gma09g00571 09 6136398 6142843 GST
Gma17g00520 17 4271325 4276699 Gma09g00571 09 6136398 6142843 PCT
Gma13g00839 13 22666274 22671833 Gma09g00571 09 6136398 6142843 PCT
Gma09g00571 09 6136398 6142843 Gma17g00520 17 4271325 4276699 PCT
Gma09g00571 09 6136398 6142843 Gma13g00839 13 22666274 22671833 PCT