Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00395 ATGGAGGAAGTTAACGttgtggaaactaaggatggaactgtctcagtagctgctgcgtttgctggtcatcaggaagCCGTGCAGGATAGAGACCACAAATTTTTAAGAAAAGCTGTTGAAGAAGCATATAAAGGGGTAGATTGCAAAGATGGAGGCCCTTTTGGTGCTGTTATAGTTCATAATGATGAAATAGTTGCTAGTTGTCACAACATGGTTCTGTGTAACACAGACCCAACTGCTCATGCTGAGGTGACAGCAATAAGAGAGGCTTGTAAGAAGCTTAAGCAGATAGAACTTGCAGATTGTGAAATATATGCTTCTTGTGAACCTTGCCCCATGTGCTTTGGTGCAATCCACCTTTCTCGAATTAAGAGGTTGGTTTATGGAGCGAAGGCTGAGGCAGCAATTGCTATTGGGTTTGATGATTTCATTGCAGATGCACTGCGAGGTACTGGATTCTATCAGAAAGCAACACTGGAAATTAAGAGAGCTGATGGTAATGAGGCCATCATTGCTGAAGAGGTTTTTGAGAAAACAAAGGAAAAATTCCAAATGTATTAG 561 0.3672 MEEVNVVETKDGTVSVAAAFAGHQEAVQDRDHKFLRKAVEEAYKGVDCKDGGPFGAVIVHNDEIVASCHNMVLCNTDPTAHAEVTAIREACKKLKQIELADCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKATLEIKRADGNEAIIAEEVFEKTKEKFQMY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00395 186 Gene3D Cytidine Deaminase, domain 2 30 186 - -
Gma17g00395 186 SUPERFAMILY Cytidine deaminase-like 24 144 IPR016193 GO:0003824
Gma17g00395 186 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 1 185 - -
Gma17g00395 186 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 1 185 - -
Gma17g00395 186 CDD nucleoside_deaminase 35 142 - -
Gma17g00395 186 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 30 129 IPR002125 -
Gma17g00395 186 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 81 118 IPR016192 GO:0008270|GO:0016787
Gma17g00395 186 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 29 143 IPR002125 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00395 Gma-Chr17 3201583 3204701 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00395 - - gmx:100500436 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00395 17 3201583 3204701 Gma13g00978 13 23885548 23888653 GST
Gma17g00395 17 3201583 3204701 Gma15g01752 15 19388349 19393095 PCT
Gma15g01752 15 19388349 19393095 Gma17g00395 17 3201583 3204701 PCT