Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01752 ATGGAGGAAGTTAATGTGGTTCAAACCAAGAATGGAACTGTTGCAGTAGCTTCTGCGTTTGCTGGACATAAGGAAGCTATACAGCAAAGGGACCACAAATTTTTAAGAATTGCTGTTGAAGAAGCCTATAAAGGGGTAGACTGTGAAGATGGGGGTCCCTTTGGTGCTATTATAGTATGTAATGATGAAATAGTTGCTCGATGTCACAACATGGTTCTGAGGAACACAGACCCTACTGCTCATGCAGAAGTCACTGTTATAAGAAAGGCTTGTGAAAAGTTAAACCAGATAGAACTTTCAGACTGTGAAATATATGCTTCTTGTGAACCTTGCCCTATGTGCTTTGGAGCAATTCACCTCTCACGAGTTAAGAGGTTGGTTTATGGAGCAAAGGCAGAGGCAGCAATTGCTATTGGATTCGATGACTTCATTTCAGATGCATTGCGAGGCACTGGATTCTACCAGAAAGCACAATTGGAGATTAAAAGGGCTGATGGCAAAGCGGCAAACATTGCTGAAGAAGTTTTTGAGAGAACCAAGGAAAAATTCCGAATGTATTAA 561 0.4135 MEEVNVVQTKNGTVAVASAFAGHKEAIQQRDHKFLRIAVEEAYKGVDCEDGGPFGAIIVCNDEIVARCHNMVLRNTDPTAHAEVTVIRKACEKLNQIELSDCEIYASCEPCPMCFGAIHLSRVKRLVYGAKAEAAIAIGFDDFISDALRGTGFYQKAQLEIKRADGKAANIAEEVFERTKEKFRMY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01752 186 Gene3D Cytidine Deaminase, domain 2 22 185 - -
Gma15g01752 186 Coils Coil 154 174 - -
Gma15g01752 186 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 29 143 IPR002125 -
Gma15g01752 186 CDD nucleoside_deaminase 35 142 - -
Gma15g01752 186 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 81 118 IPR016192 GO:0008270|GO:0016787
Gma15g01752 186 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 6 185 - -
Gma15g01752 186 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 6 185 - -
Gma15g01752 186 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 30 129 IPR002125 -
Gma15g01752 186 SUPERFAMILY Cytidine deaminase-like 25 145 IPR016193 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01752 Gma-Chr15 19388349 19393095 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01752 - - gmx:100305493 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00395 17 3201583 3204701 Gma15g01752 15 19388349 19393095 PCT
Gma13g00978 13 23885548 23888653 Gma15g01752 15 19388349 19393095 PCT
Gma15g01752 15 19388349 19393095 Gma17g00395 17 3201583 3204701 PCT
Gma15g01752 15 19388349 19393095 Gma13g00978 13 23885548 23888653 PCT