Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00978 ATGTATTTATTTATTAATATTTACGTATCGACCATATTCTATTTTTTGGTGGACCGCATTCACCTTCTTCTCCTTCTAACCCAACCTGTTTCTCCGACAATCACATTCAACGCTTCTGTCATGGAAGAAGTTAATGtcgtggaaactaaggatggaactgtctcagtagctgctgcgtttgctggtcaccaggaagCCGTGCAGGATAGAGACCACAAATTTTTAAGCAAAGCTGTTGAAGAAGCATATAAAGGGGTAGATTGTAAAGATGGAGGCCCTTTTGGTGCCGTTATAGTTCATAATGATGAAATAGTTGCTAGTTGTCACAATATGGTTCTGTGTAACACAGACCCAACTGCTCATGCTGAGGTGACAGCAATAAGAGAGGCTTGCAAGAAGCTTAAGCAGATAGAACTTGCTGATTGTGAAATATATGCTTCTTGTGAACCTTGCCCCATGTGCTTTGGTGCAATCCACCTTTCTCGAATTAAGAGGTTGGTTTATGGAGCGAAGGCCGAGGCAGCAATTGCTATTGGGTTTGATGATTTCATTGCCGATGCATTGCGAGGTACTGGATTCTATCAGAAAGCAACATTGGAAATTAAGAGAGCTGATGGTAATGAGGCCATCATTGCTGAAGAGGTTTTTGAGAAAACAAAGGAAAAATTCCAAATGTATTAG 681 0.3656 MYLFINIYVSTIFYFLVDRIHLLLLLTQPVSPTITFNASVMEEVNVVETKDGTVSVAAAFAGHQEAVQDRDHKFLSKAVEEAYKGVDCKDGGPFGAVIVHNDEIVASCHNMVLCNTDPTAHAEVTAIREACKKLKQIELADCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKATLEIKRADGNEAIIAEEVFEKTKEKFQMY 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00978 226 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 69 183 IPR002125 -
Gma13g00978 226 Gene3D Cytidine Deaminase, domain 2 70 226 - -
Gma13g00978 226 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 121 158 IPR016192 GO:0008270|GO:0016787
Gma13g00978 226 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 41 225 - -
Gma13g00978 226 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 41 225 - -
Gma13g00978 226 CDD nucleoside_deaminase 75 182 - -
Gma13g00978 226 SUPERFAMILY Cytidine deaminase-like 64 184 IPR016193 GO:0003824
Gma13g00978 226 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 70 169 IPR002125 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00978 Gma-Chr13 23885548 23888653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00978 - - gmx:100820230 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00395 17 3201583 3204701 Gma13g00978 13 23885548 23888653 GST
Gma13g00978 13 23885548 23888653 Gma15g01752 15 19388349 19393095 PCT
Gma15g01752 15 19388349 19393095 Gma13g00978 13 23885548 23888653 PCT