Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00346 ATGGTGTTGGCTTCCCCAAACTCAATAAGGAGCGAAGGGATTCTACCCAGCAACGAGCTTATTCCCGTTGTGGACCTAACAGCAGAAAGGTCACAAGTGACAAAGCTCATAGTGAAAGCGTGCGAAGAGTACGGTTTCTTCAAGGTGATAAACCACGGTATAAGCCACGAAGTGATATCAAAAACTGAAGAAGCAGGGTTTAGTTTCTTTACAAAACCGGTGGCAGAGAAGAAAGTGGCAGCACCTGCATATGGGTGCAAGAACATAGGGTTGAATGGGGACATGGGTGAGGTGGAGTACCTTCTCCTCAGTGCCACCACTCACTCCATTTCTCAGATATCCAAAACTATATCCACTGACCCATTAAACGTCAGCTCTACATTGAGTGCATACACAGAAGCAGTGAGGGAGCTCGCATGTGAGATATTGGAGCTAATAGCAGAGGGGTTGGGGGTCCCGGACACTTGGATATTCAGCAGGTTCATAAGGGATGTTGACAGTGACTCAGTTCTAAGGCTCAATCACTACCCACCTATAATTAACAAGGACAACAACAAAGACATGTCACAAAAATTTACCAAGGTTGGCTTTGGAGAGCATTCTGATCCTCAGATCATAACCATTCTCAGATCCAACGAAGTGGGTGGCCTCCAAATTTCCCTTCAAGATGGGGTCTGGATCCCAGTCACCCCTGACCCCTCAGCATTCTATGTGAACGTGGGTGATGTACTAGAGGTTATGACAAATGGAAGATTTGTAAGCGTGAGACACAGGGCTATGACGAACTCATACAAGTGTAGAATGTCAGTGGCATATTTTGGGGCTCCACCCCTCCATGCTACCATTGTTGCTCCCTCAGTTATGGTCACACCTCAGAGGCCCTCTCTCTTCCGACCATTCACTTGGGCCGAATACAAGAAAGCAACTTACTCTCTCAGGCTTGGAGACACACGCATTCAACTTTTCACAAATAAACTAAACCACTCATGA 990 0.4657 MVLASPNSIRSEGILPSNELIPVVDLTAERSQVTKLIVKACEEYGFFKVINHGISHEVISKTEEAGFSFFTKPVAEKKVAAPAYGCKNIGLNGDMGEVEYLLLSATTHSISQISKTISTDPLNVSSTLSAYTEAVRELACEILELIAEGLGVPDTWIFSRFIRDVDSDSVLRLNHYPPIINKDNNKDMSQKFTKVGFGEHSDPQIITILRSNEVGGLQISLQDGVWIPVTPDPSAFYVNVGDVLEVMTNGRFVSVRHRAMTNSYKCRMSVAYFGAPPLHATIVAPSVMVTPQRPSLFRPFTWAEYKKATYSLRLGDTRIQLFTNKLNHS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00346 329 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 324 - -
Gma17g00346 329 SUPERFAMILY Clavaminate synthase-like 20 316 - -
Gma17g00346 329 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 276 IPR005123 -
Gma17g00346 329 Pfam 2OG-Fe(II) oxygenase superfamily 168 274 IPR044861 -
Gma17g00346 329 Gene3D - 5 313 IPR027443 -
Gma17g00346 329 PRINTS Isopenicillin N synthase signature 37 54 - -
Gma17g00346 329 PRINTS Isopenicillin N synthase signature 200 221 - -
Gma17g00346 329 PRINTS Isopenicillin N synthase signature 236 262 - -
Gma17g00346 329 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 80 IPR026992 -
Gma17g00346 329 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00346 Gma-Chr17 2768820 2773536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00346 21 317 Glycosyltransferase AT5G59530 28.707 6.45e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00346 K04125 - gmx:100816206 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00346 17 2768820 2773536 Gma17g00346 17 2768820 2773536 ECH
Gma17g00346 17 2768820 2773536 Gma15g01277 15 11276949 11289176 PCT
Gma17g00346 17 2768820 2773536 Gma09g00293 09 2749091 2756875 PCT
Gma15g01277 15 11276949 11289176 Gma17g00346 17 2768820 2773536 PCT
Gma09g00293 09 2749091 2756875 Gma17g00346 17 2768820 2773536 PCT