Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01277 ATGGTAGCAGCTTCCCCAATCTCGATTCGAAGCGAAAAGATTTCACCCATTGACCTTCCCATGGTGGACCTAACCGGGGAAAGATCAATGGTGAAAAAACTCATTGTGAAGGCTTGTGAGGAGTATGGTTTCTTCAACGTGATTAACCATGGCGTCCCCCGCGACACCATAGCCAAAATGGAAGAAGCAGCTTTTGATTTCTTTGCCAAACCAATGGCCCAAAAGAAACAAGTTGCCCTTTATGGCTGCAAGAACATAGGCTTCAATGGAGACATGGGTGAGGTCGAGTACCTTCTCCTCAGTGCTACTCCTCCCTCTGTTGCTCACTTAAAAAACATCTCCAATGTGCCATCAAACTTCAGCTCTAGTGTGAGTGCATACACAGAAGGTGTGAGGGAGCTGGCATGTGAGATTTTGGAGCTAATGGCAGAGGGTCTGGGGGTCCCGGATACATGGTTTTTCAGCAGGTTGATCAGGGAGGTTGACAGTGACTCAGTCCTGAGGTTCAATCACTACCCACCTATTATACTTAACAAAGACTGCTTCAAGGACAACCACAACCACACCAAGGTCATTGGCTTTGGGGAGCATTCTGACCCTCAGATTCTTACCATCCTCAGATCCAACGACGTACCTGGCCTCCAAATCTCTCTTCAAGATGGCGTGTGGAACCCAGTTGCCCCTGACCCCTCAGCTTTCTGTGTTAATGTGGGTGATCTCTTACAGGTTATGACAAATGGGAGATTTTTGAGCGTGAGACACAGGGCCATGACCAACTCACACAAGTCTAGAATGTCGGTGGCATATTTTGGTGGTCCACCACTTGATGCATGCATTGTTGCTCCCCCAGTTATGGTTACATCCAAGAGGCCCTCCCTCCTCTTCAAGCCATTCACTTGGGCTGAATACAAGAAAGTCACCTATTCTATGAAGCTTGGAGAACGCCGCATTGACTTTTTCAGGAAGTGCACTACGCAGCAGCAAATAGAGTAA 993 0.4783 MVAASPISIRSEKISPIDLPMVDLTGERSMVKKLIVKACEEYGFFNVINHGVPRDTIAKMEEAAFDFFAKPMAQKKQVALYGCKNIGFNGDMGEVEYLLLSATPPSVAHLKNISNVPSNFSSSVSAYTEGVRELACEILELMAEGLGVPDTWFFSRLIREVDSDSVLRFNHYPPIILNKDCFKDNHNHTKVIGFGEHSDPQILTILRSNDVPGLQISLQDGVWNPVAPDPSAFCVNVGDLLQVMTNGRFLSVRHRAMTNSHKSRMSVAYFGGPPLDACIVAPPVMVTSKRPSLLFKPFTWAEYKKVTYSMKLGERRIDFFRKCTTQQQIE 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01277 330 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 273 IPR005123 -
Gma15g01277 330 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 322 - -
Gma15g01277 330 SUPERFAMILY Clavaminate synthase-like 11 313 - -
Gma15g01277 330 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 79 IPR026992 -
Gma15g01277 330 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 322 - -
Gma15g01277 330 Gene3D - 3 312 IPR027443 -
Gma15g01277 330 Pfam 2OG-Fe(II) oxygenase superfamily 164 271 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01277 Gma-Chr15 11276949 11289176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01277 10 321 Glycosyltransferase AT5G59530 27.381 3.11e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01277 K04125 - gmx:100811043 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01277 15 11276949 11289176 Gma15g01277 15 11276949 11289176 ECH
Gma15g01277 15 11276949 11289176 Gma09g00293 09 2749091 2756875 GST
Gma17g00346 17 2768820 2773536 Gma15g01277 15 11276949 11289176 PCT
Gma15g01277 15 11276949 11289176 Gma17g00346 17 2768820 2773536 PCT