Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00336 ATGAGGTGGAGCTCACTCTTTGTGCCCTCTTTTCTACTCCATATTCTTCTTCTATCTTGCATTCTTTTCACACCAACTGATTCCTCTGATGGGGATGGGGATGGGGATTTGGTAGACCAAATATGCAAAAAAACACCCTTTTATGACCTTTGCAGCTCCATCTTACACTCAAATCCCTTAGCCCCCAAAAGTGATCCAAAGGGTATGGCCCTCATAATGGTCAATGGAATTCTGACAAATGCTACTGACACACTCAGTTACATTGAAGAGCTTATCAAGCAGACCTCAGATGAACAATTAGAGCAACAGTTGGCTTTCTGTGCTGAGTCATACATCCCAGTTGTGAAGTACATTCTCCCACAAGCAGCTGATGCCATAAACCAAGGTCGATTTGGGTTTGCCAGTTACTGCATAGTTGATGCTCAGAAGGAAGTAAATGCTTGCGACAAGAAATTCTCGGGCTCAACTCAAGCACCCTTAAGTGATAGAAATGACATTATGCAGAAGCTGGTGGATGTGGCTGCTGCCATAATTAAACTATTATTAAATGGCTGA 555 0.4288 MRWSSLFVPSFLLHILLLSCILFTPTDSSDGDGDGDLVDQICKKTPFYDLCSSILHSNPLAPKSDPKGMALIMVNGILTNATDTLSYIEELIKQTSDEQLEQQLAFCAESYIPVVKYILPQAADAINQGRFGFASYCIVDAQKEVNACDKKFSGSTQAPLSDRNDIMQKLVDVAAAIIKLLLNG 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00336 184 SMART PMEI_2 33 177 IPR006501 GO:0004857
Gma17g00336 184 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 181 IPR006501 GO:0004857
Gma17g00336 184 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 182 IPR035513 -
Gma17g00336 184 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 181 IPR035513 -
Gma17g00336 184 Pfam Plant invertase/pectin methylesterase inhibitor 36 177 IPR006501 GO:0004857
Gma17g00336 184 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 10 184 - -
Gma17g00336 184 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Gma17g00336 184 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 184 - -
Gma17g00336 184 CDD CIF_like 37 181 IPR034087 GO:0004857|GO:0043086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00336 Gma-Chr17 2700549 2701286 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00336 - - gmx:100820305 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00336 17 2700549 2701286 Gma15g01286 15 11391967 11392533 PCT
Gma17g00336 17 2700549 2701286 Gma09g00302 09 2847854 2848507 PCT