Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01286 ATGAGGAGGATCCCAACCAGTGTGTCTGCTTTAGCAATTCACATTTTTCTTCTAGCTTCTATTTCTATTCCCTTGACACAATCCCAGCCCTCTTTCCCATGGAAAGATGGGAATGGCGATTTGGTAGACCAAATATGCAAAAAGACACCCTTTTACGACCTTTGCAGCTCGATCCTTCACTCAAACCCTCCGAGTCCAAAACCTGATCTCAAAGGGGTGGCCCTATTGATGGTGAACAACATTCTGGCAAATGCAACTGACACACTGAGTTACATTGAGGGGCTGATTAAGCAGACCTCAGACCGTGAGTTGGAGCAAGCCTTGGCTTTTTGTGCTGAGTTGTATATCCCAATTGTCAAATACATTCTCCCACAAGCTGCTGATGCCATAAGCCAGGGCCGTTTTGGCTTTGCCAGTTACTGCATTTCTGATGCTCTCAAAGAAGTGAGTAGCTGTGACAAGAAATTCTCTGGTGCTGCACAGGCACCCTTAGGGGACAGAAACGACATTGTGCAGAAGCTAGTGAATGTGGCTGCGGCCATAGTCAAACTACTTCTAAAGGGCTGA 567 0.4656 MRRIPTSVSALAIHIFLLASISIPLTQSQPSFPWKDGNGDLVDQICKKTPFYDLCSSILHSNPPSPKPDLKGVALLMVNNILANATDTLSYIEGLIKQTSDRELEQALAFCAELYIPIVKYILPQAADAISQGRFGFASYCISDALKEVSSCDKKFSGAAQAPLGDRNDIVQKLVNVAAAIVKLLLKG 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01286 188 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 185 IPR006501 GO:0004857
Gma15g01286 188 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 185 IPR035513 -
Gma15g01286 188 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 186 IPR035513 -
Gma15g01286 188 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 13 188 - -
Gma15g01286 188 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 188 - -
Gma15g01286 188 Pfam Plant invertase/pectin methylesterase inhibitor 40 181 IPR006501 GO:0004857
Gma15g01286 188 SMART PMEI_2 37 181 IPR006501 GO:0004857
Gma15g01286 188 CDD CIF_like 40 185 IPR034087 GO:0004857|GO:0043086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01286 Gma-Chr15 11391967 11392533 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01286 - - gmx:100791177 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01286 15 11391967 11392533 Gma15g01286 15 11391967 11392533 ECH
Gma15g01286 15 11391967 11392533 Gma09g00302 09 2847854 2848507 GST
Gma17g00336 17 2700549 2701286 Gma15g01286 15 11391967 11392533 PCT