Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00302 ATGAGGAGGATCCCAACCAGTGTGTCTTCTTTTGCAATTCACATTCTTCTTCTTCTAGCTTCTATTTCTATTTCCTTCACACTATGCCAACCCTCTTTCCCATGGAAAGATGGGAACGGCGATTTGGTAGATCAAGTGTGCAAAAAGACACCCTTTTATGATCTTTGCAGCTCGATCCTTCACTCAAACCCTCTAAGTCCAAAACCTGATCTCAAAGGGGTGGCTCTATTAATGGTGAACAACATTCTTGCAAATGCAACTGACACACTGAGTTACATTGAGGGGCTGATCAAGCAGACCCCAGACCGTGAGTTGGAGCAATCCTTGGCTTTTTGTGCTGAGTCTTATATTCCAATTGTCAAGTACATTCTCCCACAAGCTGCTGATGCCATAAGCCAGGGTCGTTTTGGCTTTGCCAGTTACTGCATTTCTGATGCTCTCAAAGAAGTGAGTAGCTGTGACAAGAAATTCTCTGGTGCTACACAAGCACCCTTAGGGGACAGAAACGACATTGTGCAGAAGCTTGTGAATGTAGCTTCGGCCATAGTCAAACTACTTCTAAAGGGCTGA 570 0.4456 MRRIPTSVSSFAIHILLLLASISISFTLCQPSFPWKDGNGDLVDQVCKKTPFYDLCSSILHSNPLSPKPDLKGVALLMVNNILANATDTLSYIEGLIKQTPDRELEQSLAFCAESYIPIVKYILPQAADAISQGRFGFASYCISDALKEVSSCDKKFSGATQAPLGDRNDIVQKLVNVASAIVKLLLKG 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00302 189 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 187 IPR035513 -
Gma09g00302 189 SMART PMEI_2 38 182 IPR006501 GO:0004857
Gma09g00302 189 CDD CIF_like 41 186 IPR034087 GO:0004857|GO:0043086
Gma09g00302 189 Pfam Plant invertase/pectin methylesterase inhibitor 41 182 IPR006501 GO:0004857
Gma09g00302 189 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 189 - -
Gma09g00302 189 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 186 IPR035513 -
Gma09g00302 189 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 14 189 - -
Gma09g00302 189 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00302 Gma-Chr9 2847854 2848507 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00302 - - gmx:100527840 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00302 09 2847854 2848507 Gma09g00302 09 2847854 2848507 ECH
Gma15g01286 15 11391967 11392533 Gma09g00302 09 2847854 2848507 GST
Gma17g00336 17 2700549 2701286 Gma09g00302 09 2847854 2848507 PCT