Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00297 ATGCATTCCTCGCTCTCTCTCTCGTTCTCCGCCACTTCCTCCTCCGTCGCCACTGTTTCCAGATCACGCCACTCATTCCACTCTCCCGCCGCCGCCATGCCTCTCAATCTCCGCTTCTGCGGCTTGAGGCGCGATGCATTTGGTTCAGGTCTCGCTGCTTCTCTCAACCGCTACCACTCCCACCTCCCTCGCCGCCCTCACTCCGCCGCAGTCTCTGCCGCGCTATCTAGCAATGGAAGCCCTCCCAAATCGTTTGACTACGATTTGCTGATAATCGGCGCCGGCGTTGGCGGCCACGGCGCCGCGCTTCATGCCGTTGAGAAGGGTTTGAAAACAGCCATTGTGGAAGGAGATGTGGTGGGAGGGACATGTGTGAACAGAGGCTGTGTTCCTTCCAAAGCTCTTTTAGCCGTGAGTGGTCGTATGCGAGAACTAAGGAGCGATCATCACTTGAAGTCCTTTGGCTTACAGGTTTCTGCTGCTGGCTATGACAGACAAGGAGTCGCTGATCATGCTAATAACCTTGCTTCGAAAATCCGTAATAATTTGACCAACTCAATGAAAGCACTTGGAGTAGACATACTTACTGGTTTTGGAACTATTCTGGGTCCTCAAAAGGTGAAAGTTGGCTCTTCAGACAAAATAGTAACTGCAAAAAATATCATCATTGCTACTGGTTCTGTTCCTTTTGTTCCTAAGGGCATTGAAATTGATGGGAAGACTGTGATTACCAGTGACCACGCACTCAAACTGGAGTCTGTTCCTGATTGGATAGCAATTGTAGGAAGTGGATATATTGGTCTTGAATTCAGTGATGTATATACAGCACTTGGAAGTGAGGTTACTTTTATAGAAGCTTTAGATCAACTTATGCCTGGATTTGATCCTGAAATTAGCAAGTTGGCTCAGAGGGTCCTTATAAATCCCCGGAATATTGACTATCATACTGGAGTTTTTGCAACCAAGATCACGCCTGCAAGGGATGGAAAACCTGTCTTGATTGAACTTATTGATGCGAAAACCAAGGAGCCGAAAGACACGCTGGAGGTGGATGCTGCACTAATAGCAACTGGAAGGGCTCCGTTCACACAAGGTCTTGGATTGGAGAATATTGATGTGGTAACACAGCGTGGTTTTGTTCCAGTGGATGAGCACATGCGAGTAATTGATGCGAATGGCAAGCTGGTGCCTCATTTATATTGTATTGGTGATGCAAATGGCAAGATGATGCTTGCTCATGCTGCCAGTGCACAAGGAATTTCAGTGGTTGAACAAGTCACTGGAAAAGATCACGTGCTCAATCATTTAAGCATCCCAGCTGCTTGTTTCACTCATCCTGAACTTAGCATGGTTGGATTAACAGAGCCTCAAGCAAGGGTGAAAGGTGAAAAAGAGGGGTTTGAAGTAAGTGTTGCCAAAACAAGTTTTAAAGCTAACACAAAGGCTCTAGCAGAAAACGAAGGAGAGGGACTAGCCAAGTTGATATACAGACCTGACAATGGAGAGATACTAGGAGTTCATATTTTTGGTTTGCATGCAGCAGATCTCATCCATGAAGCATCCAATGCAATAGCATTAGGGACACATATTCAGGACATAAAATTTGCCGTTCATGCACATCCAACTTTGTCCGAGGTTCTTGATGAACTATTCAAATCAGCAAAGGTTAAAGCACAAGCTTCTAGCCCAGGACTTCCAAAATATTCATCTTCAGGAGGAACACACAAACACATTCAGAATCCTGTAAAAGAGGGGAACCGTTTGAGGGAAATCAAGAATGACCTGATTATGGATAACCGCCGAAGCTTACATACCTTTGGCTTCACTACGTACTACGTAAAGCTTCGAACTAGTATTGGATGGAAGTCTTTTCCCTATGGCCATGGTTGTCATTGGTATCGGTCTACGAGTATTTATTGCCTTATTGGTAATGGCATATGTGCAAATACGAAGCATTCACATGCATCTGATTTGATCAACAAGTTGTGTGAATGA 1995 0.4546 MHSSLSLSFSATSSSVATVSRSRHSFHSPAAAMPLNLRFCGLRRDAFGSGLAASLNRYHSHLPRRPHSAAVSAALSSNGSPPKSFDYDLLIIGAGVGGHGAALHAVEKGLKTAIVEGDVVGGTCVNRGCVPSKALLAVSGRMRELRSDHHLKSFGLQVSAAGYDRQGVADHANNLASKIRNNLTNSMKALGVDILTGFGTILGPQKVKVGSSDKIVTAKNIIIATGSVPFVPKGIEIDGKTVITSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEISKLAQRVLINPRNIDYHTGVFATKITPARDGKPVLIELIDAKTKEPKDTLEVDAALIATGRAPFTQGLGLENIDVVTQRGFVPVDEHMRVIDANGKLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGKDHVLNHLSIPAACFTHPELSMVGLTEPQARVKGEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTHIQDIKFAVHAHPTLSEVLDELFKSAKVKAQASSPGLPKYSSSGGTHKHIQNPVKEGNRLREIKNDLIMDNRRSLHTFGFTTYYVKLRTSIGWKSFPYGHGCHWYRSTSIYCLIGNGICANTKHSHASDLINKLCE 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00297 664 Gene3D - 230 357 IPR036188 -
Gma17g00297 664 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 121 131 IPR012999 GO:0016668
Gma17g00297 664 Gene3D - 437 561 IPR016156 GO:0016491|GO:0050660
Gma17g00297 664 PANTHER DISULFIDE OXIDOREDUCTASE 22 563 - -
Gma17g00297 664 TIGRFAM lipoamide_DH: dihydrolipoyl dehydrogenase 87 557 IPR006258 GO:0004148|GO:0050660
Gma17g00297 664 SUPERFAMILY FAD/NAD(P)-binding domain 73 428 IPR036188 -
Gma17g00297 664 PRINTS FAD-dependent pyridine nucleotide reductase signature 89 108 - -
Gma17g00297 664 PRINTS FAD-dependent pyridine nucleotide reductase signature 384 406 - -
Gma17g00297 664 PRINTS FAD-dependent pyridine nucleotide reductase signature 350 366 - -
Gma17g00297 664 PRINTS FAD-dependent pyridine nucleotide reductase signature 257 275 - -
Gma17g00297 664 PRINTS FAD-dependent pyridine nucleotide reductase signature 218 236 - -
Gma17g00297 664 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 437 551 IPR016156 GO:0016491|GO:0050660
Gma17g00297 664 Gene3D - 88 420 IPR036188 -
Gma17g00297 664 PRINTS Pyridine nucleotide disulphide reductase class-I signature 434 455 - -
Gma17g00297 664 PRINTS Pyridine nucleotide disulphide reductase class-I signature 351 365 - -
Gma17g00297 664 PRINTS Pyridine nucleotide disulphide reductase class-I signature 120 135 - -
Gma17g00297 664 PRINTS Pyridine nucleotide disulphide reductase class-I signature 257 282 - -
Gma17g00297 664 PRINTS Pyridine nucleotide disulphide reductase class-I signature 88 110 - -
Gma17g00297 664 PRINTS Pyridine nucleotide disulphide reductase class-I signature 525 545 - -
Gma17g00297 664 PRINTS Pyridine nucleotide disulphide reductase class-I signature 399 406 - -
Gma17g00297 664 PRINTS Pyridine nucleotide disulphide reductase class-I signature 503 518 - -
Gma17g00297 664 PRINTS Pyridine nucleotide disulphide reductase class-I signature 221 230 - -
Gma17g00297 664 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 438 549 IPR004099 GO:0045454
Gma17g00297 664 PANTHER DIHYDROLIPOAMIDE DEHYDROGENASE 22 563 - -
Gma17g00297 664 Pfam Pyridine nucleotide-disulphide oxidoreductase 87 419 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00297 Gma-Chr17 2400788 2409490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00297 1 562 Acyl Lipid Metabolism Gene Families AT3G16950 82.394 0.0 921
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00297 K00382 - gmx:100782004 1069.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00297 17 2400788 2409490 Gma17g00297 17 2400788 2409490 ECH
Gma17g00297 17 2400788 2409490 Gma15g01336 15 11882158 11887927 PCT
Gma17g00297 17 2400788 2409490 Gma09g00344 09 3217703 3222140 PCT
Gma15g01336 15 11882158 11887927 Gma17g00297 17 2400788 2409490 PCT
Gma09g00344 09 3217703 3222140 Gma17g00297 17 2400788 2409490 PCT