Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01336 ATGCAATCTTCCATTTCACTCTCTTCTTCCTACGCTCCCACCATTTCGGGACCACGCCACTCTTTTCCCCTCTCCGGTCGCACTCTCGCGCCTTCGAATCTCCGTTTCTGCGGCCTCCGGCGACAGGCATTCACTTCCACTCCCCTCAACCACCACTTCCGCCTCCGCCGACGCCGCCTCCCGCATTCCGCCGCGGTATCCGCCGCGCTTTCCGCCAACGGTACCTCTCCCAAGTCGTTCGACTACGACTTGCTCATCATCGGCGCCGGCGTTGGCGGCCACGGCGCCGCGCTCCACGCCGTCGAGAAGGGTTTGAAAACGGCCATTGTTGAGGGAGACGTGGTTGGAGGGACATGTGTGAACAGAGGATGTGTTCCTTCTAAGGCTCTTTTGGCTGTGAGTGGTCGAATGCGAGAGCTGCGGAATGATCATCACTTGAAGTCGCTGGGTTTGCAGGTTTCTGCTGCTGAGTATGACAGACAAGCAGTTGCTGACCATGCTAATAATCTTGCTTCGAAAATTCGTGGCAACTTGACCAACTCCTTAAAAGCACTTGGAGTGGACATTCTCACTGGTTTTGGAACTATTTTAGGTCCTCAAAAAGTGAAAGTTGTCTCTTCCAACAATGTGGTGACTGCCAAAGACATCATCATTGCCACTGGTTCAGTTCCTTTTGTTCCAAAGGGCATTGAGGTTGATGGAAAGACTGTGATTACCAGTGACCATGCACTCAAACTGGAGACTGTTCCTGATTGGATAGCAATTGTAGGAAGTGGTTATATTGGCCTTGAATTCAGTGATGTATATACGGCCCTTGGAAGTGAGGTTACTTTTATTGAAGCTTTAGACCAGCTCATGCCTGGATTTGATCCTGAAATTAGCAAGTTGGCTCAGAGGGTTCTCATAAATCCCCGGAATATTGACTATCATACTGGAGTTTTTGCATCCAAGATCACTCCTGCAAGAGACGGAAAACCTGTCACAATTGAGCTCATTGATGCAAAGACCAAGGAACAGAAGGACACTTTAGAGGTGGATGCTGCACTAATAGCAACAGGAAGGGCTCCATTCACACAAGGTCTTGGATTGGAGAATATTGATGTTGTAACGCAGCGTGGTTTTGTTCCTGTCGATGAGCGCATGAGAGTACTTGATGCAAATGGAAACCTGGTTCCTCATTTGTATTGTATTGGTGATGCAAATGGCAAGATGATGCTTGCTCATGCTGCCAGCGCACAAGGAATTTCAGTGGTTGAACAAGTGACCGGAAGAGATCACGTGCTCAATCATTTAAGCATACCAGCTGCTTGTTTCACTCATCCTGAAATCAGCATGGTTGGATTGACAGAGCCTCAAGCAAGGGAGAAAGCTGAAAAGGAGGGTTTTGAAGTAAGTGTTGCCAAAACAAGTTTTAAAGCTAACACAAAGGCCTTAGCTGAAAACGAAGGGGAGGGTCTTGCCAAGTTGATATACAGGCCTGACACTGGAGAGATACTGGGAGTTCATATATTTGGGTTGCATGCTGCTGATCTCATCCACGAGGCATCCAATGCAATAGCATTAGGAACACGTATTCAGGATATAAAATTTGCAGTACATGCTCATCCAACTTTGTCTGAGGTGCTTGATGAGCTATTTAAGTCAGCAAAGGTTAAAGCAGAAGCTTCTGAGCCAATAAAGGAAGCTGTTGCAGTTTAA 1698 0.477 MQSSISLSSSYAPTISGPRHSFPLSGRTLAPSNLRFCGLRRQAFTSTPLNHHFRLRRRRLPHSAAVSAALSANGTSPKSFDYDLLIIGAGVGGHGAALHAVEKGLKTAIVEGDVVGGTCVNRGCVPSKALLAVSGRMRELRNDHHLKSLGLQVSAAEYDRQAVADHANNLASKIRGNLTNSLKALGVDILTGFGTILGPQKVKVVSSNNVVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLETVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEISKLAQRVLINPRNIDYHTGVFASKITPARDGKPVTIELIDAKTKEQKDTLEVDAALIATGRAPFTQGLGLENIDVVTQRGFVPVDERMRVLDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDTGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKSAKVKAEASEPIKEAVAV 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01336 565 Pfam Pyridine nucleotide-disulphide oxidoreductase 82 414 IPR023753 GO:0016491
Gma15g01336 565 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 116 126 IPR012999 GO:0016668
Gma15g01336 565 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 433 544 IPR004099 GO:0045454
Gma15g01336 565 PIRSF Hg-II_reductase_MerA 55 547 IPR001100 GO:0016491
Gma15g01336 565 Gene3D - 83 415 IPR036188 -
Gma15g01336 565 PRINTS FAD-dependent pyridine nucleotide reductase signature 84 103 - -
Gma15g01336 565 PRINTS FAD-dependent pyridine nucleotide reductase signature 213 231 - -
Gma15g01336 565 PRINTS FAD-dependent pyridine nucleotide reductase signature 252 270 - -
Gma15g01336 565 PRINTS FAD-dependent pyridine nucleotide reductase signature 345 361 - -
Gma15g01336 565 PRINTS FAD-dependent pyridine nucleotide reductase signature 379 401 - -
Gma15g01336 565 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 432 546 IPR016156 GO:0016491|GO:0050660
Gma15g01336 565 SUPERFAMILY FAD/NAD(P)-binding domain 70 423 IPR036188 -
Gma15g01336 565 PANTHER DIHYDROLIPOAMIDE DEHYDROGENASE 13 557 - -
Gma15g01336 565 Gene3D - 432 557 IPR016156 GO:0016491|GO:0050660
Gma15g01336 565 TIGRFAM lipoamide_DH: dihydrolipoyl dehydrogenase 82 551 IPR006258 GO:0004148|GO:0050660
Gma15g01336 565 Gene3D - 225 352 IPR036188 -
Gma15g01336 565 PANTHER DISULFIDE OXIDOREDUCTASE 13 557 - -
Gma15g01336 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 83 105 - -
Gma15g01336 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 115 130 - -
Gma15g01336 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 216 225 - -
Gma15g01336 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 252 277 - -
Gma15g01336 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 346 360 - -
Gma15g01336 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 394 401 - -
Gma15g01336 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 429 450 - -
Gma15g01336 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 498 513 - -
Gma15g01336 565 PRINTS Pyridine nucleotide disulphide reductase class-I signature 520 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01336 Gma-Chr15 11882158 11887927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01336 1 556 Acyl Lipid Metabolism Gene Families AT4G16155 81.866 0.0 903
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01336 K00382 - gmx:100803176 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01336 15 11882158 11887927 Gma15g01336 15 11882158 11887927 ECH
Gma15g01336 15 11882158 11887927 Gma09g00344 09 3217703 3222140 GST
Gma17g00297 17 2400788 2409490 Gma15g01336 15 11882158 11887927 PCT
Gma15g01336 15 11882158 11887927 Gma17g00297 17 2400788 2409490 PCT