Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00344 ATGAACCAGCTACCTATATGTTTCTCCCTCTATAGACCTAAAGAATTTAGTGTACAACTTGAAAGAATGGACAAAAAAGTTACTTTTATTGAAGCTTTAGACCAGCTCATGCCGGGATTTGATCCTGAAATTAGCAAGTTGGCTCAGAGGGTTCTCATAAATCCCCGGAATATTGACTATCATACTGGAGTTTTTGCATCCAAGATCACTCCTGCAAGAGATGGAAAACCTGTCACAATTGAGCTCATTGATGCAAAGACCAAGGAACAAAAGGACAGTTTAGAGGTGGATGCTGCACTAATAGCAACAGGAAGGGCTCCATTTACACAAGGTCTTGGATTGGAGAATATTGATGTTGTAACACAGCGTGGTTTTGTTCCTGTGGATGAGCGCATGAGAGTACTTGATGCAAATGGAAACCTGGTTCCTCATTTGTATTGCATTGGTGATACAAATGGCAAGATGATGCTTGCTCATGCTGCCAGTGCACAAGGAATTTCAGTGGTTGAACAAGTCACTGGAAGAGATCACGTGCTCAATCATTTAAGCATACCAGCTGCTTGTTTCACTCATCCTGAAATCAGCATGGTTGGATTGACTGAGCCTCAAGCAAGGGAGAAAGCTGAAAAGGAGGGTTTTGAAGTAAGTGTTGCCAAAACAAGTTTTAAAGCTAACACAAAGGCCTTAGCTGAAAACGAAGGGGAGGGTCTTGCCAAGTTGATATACAGACCTGACACTGGAGAGATATTGGGAGTCCATATATTTGGGTTGCATGCTGCTGATCTCATCCACGAGGCATCCAATGCAATAGCACTAGGATCACACATTCAGGATATAAAATTTGCAGTTCATGCTCATCCGACTTTGTCTGAGGTGCTTGATGAGCTATTTAAATCTGCAAAGGTGAAGTATCCATTATTTACTTCCAGACTTGCACGAACTAACACACAAATAGTTAGTTATAGCCGGTGCTTTAACACGTGCTCCCCTATTCAATTATTAAAGCAGGTTAAAGCACAAGCTTCTGAGCCAGTAAAGGAAGCTGTTGCAGTTTAA 1056 0.4176 MNQLPICFSLYRPKEFSVQLERMDKKVTFIEALDQLMPGFDPEISKLAQRVLINPRNIDYHTGVFASKITPARDGKPVTIELIDAKTKEQKDSLEVDAALIATGRAPFTQGLGLENIDVVTQRGFVPVDERMRVLDANGNLVPHLYCIGDTNGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDTGEILGVHIFGLHAADLIHEASNAIALGSHIQDIKFAVHAHPTLSEVLDELFKSAKVKYPLFTSRLARTNTQIVSYSRCFNTCSPIQLLKQVKAQASEPVKEAVAV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00344 351 SUPERFAMILY FAD/NAD(P)-binding domain 49 203 IPR036188 -
Gma09g00344 351 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 183 298 IPR016156 GO:0016491|GO:0050660
Gma09g00344 351 Pfam Pyridine nucleotide-disulphide oxidoreductase 15 165 IPR023753 GO:0016491
Gma09g00344 351 PANTHER DIHYDROLIPOAMIDE DEHYDROGENASE 18 309 - -
Gma09g00344 351 Gene3D - 12 181 IPR036188 -
Gma09g00344 351 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 184 295 IPR004099 GO:0045454
Gma09g00344 351 PRINTS Pyridine nucleotide disulphide reductase class-I signature 180 201 - -
Gma09g00344 351 PRINTS Pyridine nucleotide disulphide reductase class-I signature 145 152 - -
Gma09g00344 351 PRINTS Pyridine nucleotide disulphide reductase class-I signature 249 264 - -
Gma09g00344 351 PRINTS Pyridine nucleotide disulphide reductase class-I signature 271 291 - -
Gma09g00344 351 PRINTS Pyridine nucleotide disulphide reductase class-I signature 97 111 - -
Gma09g00344 351 Gene3D - 183 304 IPR016156 GO:0016491|GO:0050660
Gma09g00344 351 PANTHER DISULFIDE OXIDOREDUCTASE 18 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00344 Gma-Chr9 3217703 3222140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00344 2 305 Acyl Lipid Metabolism Gene Families AT4G16155 85.197 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00344 K00382 - gmx:100803176 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00344 09 3217703 3222140 Gma09g00344 09 3217703 3222140 ECH
Gma15g01336 15 11882158 11887927 Gma09g00344 09 3217703 3222140 GST
Gma17g00297 17 2400788 2409490 Gma09g00344 09 3217703 3222140 PCT
Gma09g00344 09 3217703 3222140 Gma17g00297 17 2400788 2409490 PCT