Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00234 ATGGAGGAACCGAGCAAACTGAAGCGTGCCATGATTGATTCCTGGGCTGGGGCAATTTCTGGTGGAATATCACGGACAGTTACCTCGCCCCTCGATGTTATTAAGATTCGATTCCAGGTTCAGCTAGAGCCCACATCTTCATGGGCTTTATTACGGAAGGATTTGGCTGCAGCATCAAAATACACTGGTATGTTTCAAGCAACCAAGGACATTCTTAGAGAAGAAGGCGTACAGGGGTTTTGGCGGGGAAATGTGCCGGCATTGCTCATGGTTATGCCATATACAGCTATACAATTTACAGTTTTACACAAGTTGAAGACTTTTGCCTCTGGTTCTTCCAAATCAGAGAATCACATTAATTTGAGCCCTTGTCTATCCTACCTCAGTGGGGCATTAGCTGGGTGTGCAGCTACATTAGGTTCTTATCCCTTTGATCTTCTCCGAACTATATTAGCTTCTCAAGGTGAACCAAAGGTATATCCAAACATGAGGTCTGCATTCATGGATATCATCCATACTCGTGGATTCCAAGGCTTGTATTCTGGATTATCGCCAACTTTAGTGGAGATTATACCTTATGCAGGCCTACAATTTGGCACATATGATACATTTAAGCGTTGGGGCATGGCTTGGAATCATAGATACTCCAACACTTCTGCAGAAGATAACCTCTCTAGCTTTCAGCTTTTCCTTTGTGGATTGGCAGCGGGAACATGTGCCAAGCTTGTCTGTCATCCACTAGATGTTGTCAAAAAAAGATTTCAGATTGAAGGGCTTCAAAGGCATCCAAGATATGGAGCTCGAGTTGAGCATCGTGCATACAGGAATATGCCTGATGCCATGCAACGGATATTTCGATTAGAGGGTTGGGCTGGTCTGTACAAGGGGATAATTCCATCAACTGTCAAAGCTGCACCTGCTGGTGCTGTGACATTTGTTGCTTATGAATTGACATCAGATTGGTTAGAGTCCACTTTCAATTGA 984 0.44 MEEPSKLKRAMIDSWAGAISGGISRTVTSPLDVIKIRFQVQLEPTSSWALLRKDLAAASKYTGMFQATKDILREEGVQGFWRGNVPALLMVMPYTAIQFTVLHKLKTFASGSSKSENHINLSPCLSYLSGALAGCAATLGSYPFDLLRTILASQGEPKVYPNMRSAFMDIIHTRGFQGLYSGLSPTLVEIIPYAGLQFGTYDTFKRWGMAWNHRYSNTSAEDNLSSFQLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYRNMPDAMQRIFRLEGWAGLYKGIIPSTVKAAPAGAVTFVAYELTSDWLESTFN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00234 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 207 IPR018108 -
Gma17g00234 327 Gene3D Mitochondrial carrier domain 5 325 IPR023395 -
Gma17g00234 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 108 IPR018108 -
Gma17g00234 327 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 3 326 - -
Gma17g00234 327 Pfam Mitochondrial carrier protein 124 207 IPR018108 -
Gma17g00234 327 Pfam Mitochondrial carrier protein 224 323 IPR018108 -
Gma17g00234 327 Pfam Mitochondrial carrier protein 14 109 IPR018108 -
Gma17g00234 327 SUPERFAMILY Mitochondrial carrier 8 316 IPR023395 -
Gma17g00234 327 PRINTS Mitochondrial carrier protein signature 13 26 IPR002067 GO:0055085
Gma17g00234 327 PRINTS Mitochondrial carrier protein signature 26 40 IPR002067 GO:0055085
Gma17g00234 327 PRINTS Mitochondrial carrier protein signature 83 103 IPR002067 GO:0055085
Gma17g00234 327 PRINTS Mitochondrial carrier protein signature 136 154 IPR002067 GO:0055085
Gma17g00234 327 PRINTS Mitochondrial carrier protein signature 180 198 IPR002067 GO:0055085
Gma17g00234 327 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Gma17g00234 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 321 IPR018108 -
Gma17g00234 327 PANTHER SOLUTE CARRIER FAMILY 25 3 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00234 Gma-Chr17 1909984 1913081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00234 1 327 Organic Solute Cotransporters AT3G21390 74.096 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00234 K15108 - gmx:100805353 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00234 17 1909984 1913081 Gma15g01426 15 12852780 12860269 PCT
Gma17g00234 17 1909984 1913081 Gma09g00424 09 3993914 3998564 PCT
Gma15g01426 15 12852780 12860269 Gma17g00234 17 1909984 1913081 PCT
Gma09g00424 09 3993914 3998564 Gma17g00234 17 1909984 1913081 PCT