Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00424 ATGGAGGGGGAACCGAGCCAGCTGAAGCGTGCCGCGATTGATGCCTCTGCTGGAGCTATCTCCGGTGGCATATCCAGGACAGTGACGTCACCTCTCGATGTTATTAAGATTAGGTTCCAGGTTCAACTAGAGCCCACATCTTCATGGACTTTACTACGCAAGGATTTGTCTACACCTTCAAAGTATACTGGCATGCTTCAAGCAAGCAAAGATATTTTTAGAGAAGAAGGCATATGGGGTTTTTGGCGGGGCAATGTGCCAGCTTTGCTCATGGTTATGCCATATACAGCTATACAATTTACTGTTCTACACAAGTTGAAGACTTTTGCCGCTAGTTCTTCCAAGACAGAGAATCACATTAATTTGAGCCCTTATCTATCCTACATGAGTGGGGCATTAGCTGGGTGTGCTGCTACAGTAGGGTCATATCCCTTTGATCTTCTCCGAACCATATTAGCTTCCCAGGGTGAACCGAAGGTTTATCCAAACATGAGGGCAGCATTAGTTGATATTCTCCAGACTCGTGGCTTCCGAGGCTTGTATGCTGGACTGTCACCAACCCTAGTTGAGATTATACCTTATGCAGGTCTACAATTTGGCACCTATGATACATTTAAACGTTGGACCATGGCGTGGAATCAGCGCCAATATTCAAATCCTACTGCAGAAAGCCTCTCTAGCTTTCAGCTTTTCCTGTGTGGGTTGGCTGCAGGAACATGTGCCAAGCTCGTCTGTCATCCACTTGATGTGGTCAAAAAAAGATTTCAGATTGAAGGTCTTCAAAGACATCCAAGATATGGAGCTCGGGTTGAACATCGTGCCTACAAAAATATGTTAGATGCCATGAAAAGAATATTACAGATGGAGGGTTGGGCTGGTCTATATAAGGGGATACTCCCATCAACTGTTAAAGCTGCACCAGCTGGTGCTGTAACATTTGTTGCGTATGAATTGACAGTAGATTGGCTGGAATCTATTTTGACTTGA 987 0.4488 MEGEPSQLKRAAIDASAGAISGGISRTVTSPLDVIKIRFQVQLEPTSSWTLLRKDLSTPSKYTGMLQASKDIFREEGIWGFWRGNVPALLMVMPYTAIQFTVLHKLKTFAASSSKTENHINLSPYLSYMSGALAGCAATVGSYPFDLLRTILASQGEPKVYPNMRAALVDILQTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMAWNQRQYSNPTAESLSSFQLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYKNMLDAMKRILQMEGWAGLYKGILPSTVKAAPAGAVTFVAYELTVDWLESILT 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00424 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 109 IPR018108 -
Gma09g00424 328 Gene3D Mitochondrial carrier domain 6 325 IPR023395 -
Gma09g00424 328 Pfam Mitochondrial carrier protein 225 323 IPR018108 -
Gma09g00424 328 Pfam Mitochondrial carrier protein 14 110 IPR018108 -
Gma09g00424 328 Pfam Mitochondrial carrier protein 123 209 IPR018108 -
Gma09g00424 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 208 IPR018108 -
Gma09g00424 328 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 4 327 - -
Gma09g00424 328 PANTHER SOLUTE CARRIER FAMILY 25 4 327 - -
Gma09g00424 328 SUPERFAMILY Mitochondrial carrier 10 317 IPR023395 -
Gma09g00424 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 322 IPR018108 -
Gma09g00424 328 PRINTS Mitochondrial carrier protein signature 14 27 IPR002067 GO:0055085
Gma09g00424 328 PRINTS Mitochondrial carrier protein signature 27 41 IPR002067 GO:0055085
Gma09g00424 328 PRINTS Mitochondrial carrier protein signature 137 155 IPR002067 GO:0055085
Gma09g00424 328 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Gma09g00424 328 PRINTS Mitochondrial carrier protein signature 181 199 IPR002067 GO:0055085
Gma09g00424 328 PRINTS Mitochondrial carrier protein signature 84 104 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00424 Gma-Chr9 3993914 3998564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00424 4 328 Organic Solute Cotransporters AT3G21390 74.848 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00424 K15108 - gmx:100803750 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00424 09 3993914 3998564 Gma09g00424 09 3993914 3998564 ECH
Gma15g01426 15 12852780 12860269 Gma09g00424 09 3993914 3998564 GST
Gma17g00234 17 1909984 1913081 Gma09g00424 09 3993914 3998564 PCT
Gma09g00424 09 3993914 3998564 Gma17g00234 17 1909984 1913081 PCT