Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01426 ATGCAGTGCTTGAACCCGTTTGATGCCTTTTTGAAGTGCAATTGCTTCAGCTACTGCTGGAAAATAGCCGGATCCAGCTTGCATTTATGTAGCCATTCGGAGGAGGAGACCAATTTGTGGGTGACTAGAGAGCTTGaaagAGGCGGAGAAAGTCGCCGCCCTAAAAAATCTTCCCAATCAAAAATAGGCGGCAACAAACAACACAACAGCACCTTTTCCCTTTCCCTTTCTCTCACTACTTTCTCTCTCTACAACCTCCAATGTTCCCTCCCTTCTCCATTGCCTCCTTCCTCGTCCTCTCTCGCCGGTTGTAGTTGGAAAAAAGGAAGGGTTTTTACTTTAGCGGCAATGGAGGGGGAACCGAGCCAACTGAAGCGTGCCGCGATTGATGCCTCTGCTGGAGCTATTTCCGGTGGCATTTCCAGGACAATCACGTCACCTCTCGATGTTATTAAGATTAGGTTCCAGGTTCAACTAGAGCCCACATCTTCATGGACTTTACTATGCAAGGATTTGTCTACACCTTCAAAATATACTGGCATGCTTCAAGCAACCAAAGATATTTTTAGAGAAGAAGGCATACGGGGTTTTTGGCGGGGCAATGTGCCAGCTTTGCTCATGGTTATGCCATATACAGCTATACAATTTACTGTTCTACACAAGTTGAAGACTTTTGCCTCTGGTTCTTCCAATACAGAGAATTACATTAATTTGAGCCCTTATCTATCCTACATGAGTGGAGCATTAGCTGGGTGTGCTGCTACAGTAGGGTCATATCCCTTTGATCTTCTCCGAACCATATTAGCTTCCCAGGGTGAACCGAAGGTTTATCCAAACATGAGGACAGCATTAGTTGATATTCTGCAGACTCGTGGCTTCCGAGGCTTGTATGCTGGACTGTCACCAACCCTAGTTGAGATTATACCATATGCAGGTCTACAATTTGGCACCTATGATACATTTAAACGTTGGACCATGGCGTGGAATCATCGTCAATATTCAAATCCTACTGCAGAAAGCCTCTCTAGCTTTGAGCTTTTCCTGTGTGGGTTGGCTGCTGGAACATGTGCCAAGCTCGTCTGTCATCCACTTGATGTGGTCAAAAAAAGATTTCAGATTGAAGGTCTTCAAAGACATCCAAGATATGGAGCTCGGGTTGAACATCGTGCCTACAAAAATATGTTAGATGCCGTGAAAAGAATATTACAGATGGAGGGTTGGGCTGGTCTATATAAGGGGATAGTCCCATCAACTGTTAAAGCTGCACCAGCTGGTGCTGTAACATTTGTTGCGTATGAATTGACAGTAGATTGGCTGGAATCTTTTTTAACTTGA 1335 0.4464 MQCLNPFDAFLKCNCFSYCWKIAGSSLHLCSHSEEETNLWVTRELERGGESRRPKKSSQSKIGGNKQHNSTFSLSLSLTTFSLYNLQCSLPSPLPPSSSSLAGCSWKKGRVFTLAAMEGEPSQLKRAAIDASAGAISGGISRTITSPLDVIKIRFQVQLEPTSSWTLLCKDLSTPSKYTGMLQATKDIFREEGIRGFWRGNVPALLMVMPYTAIQFTVLHKLKTFASGSSNTENYINLSPYLSYMSGALAGCAATVGSYPFDLLRTILASQGEPKVYPNMRTALVDILQTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMAWNHRQYSNPTAESLSSFELFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYKNMLDAVKRILQMEGWAGLYKGIVPSTVKAAPAGAVTFVAYELTVDWLESFLT 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01426 444 PRINTS Mitochondrial carrier protein signature 297 315 IPR002067 GO:0055085
Gma15g01426 444 PRINTS Mitochondrial carrier protein signature 143 157 IPR002067 GO:0055085
Gma15g01426 444 PRINTS Mitochondrial carrier protein signature 200 220 IPR002067 GO:0055085
Gma15g01426 444 PRINTS Mitochondrial carrier protein signature 130 143 IPR002067 GO:0055085
Gma15g01426 444 PRINTS Mitochondrial carrier protein signature 253 271 IPR002067 GO:0055085
Gma15g01426 444 PRINTS Mitochondrial carrier protein signature 350 372 IPR002067 GO:0055085
Gma15g01426 444 ProSiteProfiles Solute carrier (Solcar) repeat profile. 341 438 IPR018108 -
Gma15g01426 444 SUPERFAMILY Mitochondrial carrier 126 433 IPR023395 -
Gma15g01426 444 PANTHER SOLUTE CARRIER FAMILY 25 120 443 - -
Gma15g01426 444 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 120 443 - -
Gma15g01426 444 Pfam Mitochondrial carrier protein 130 226 IPR018108 -
Gma15g01426 444 Pfam Mitochondrial carrier protein 239 325 IPR018108 -
Gma15g01426 444 Pfam Mitochondrial carrier protein 341 439 IPR018108 -
Gma15g01426 444 Gene3D Mitochondrial carrier domain 122 441 IPR023395 -
Gma15g01426 444 MobiDBLite consensus disorder prediction 45 66 - -
Gma15g01426 444 ProSiteProfiles Solute carrier (Solcar) repeat profile. 238 324 IPR018108 -
Gma15g01426 444 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 225 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01426 Gma-Chr15 12852780 12860269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01426 120 444 Organic Solute Cotransporters AT3G21390 74.242 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01426 K15108 - gmx:100783563 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01426 15 12852780 12860269 Gma09g00424 09 3993914 3998564 GST
Gma17g00234 17 1909984 1913081 Gma15g01426 15 12852780 12860269 PCT
Gma15g01426 15 12852780 12860269 Gma17g00234 17 1909984 1913081 PCT