Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01392 ATGATGATGGGAAAAGGTTGGTTTTTGAGATTGGTTATGGTGATTGGTGTGATGGGTTGGTGTTGGTGGTGTGTGGAAGGGCTTGGAGTGAATTGGGGGACTCAAGCCACACACCAGTTGAAGGCAGACACAGTGGTTGAGATGCTGAAGGACAATGGGATCCAAAAGGTGAAACTGTTTGATGCAGATGAGTCTAGCATGAGTGCTCTATCTGGCTCTGGCATTGAAGTCATGGTTGCCATTCCCAATAACCAGCTTGCTGAGATGAATGACTATGATCGTGCCTTGCAGTGGGTCAAGAAGAATGTCACTCGTTACAACTTCAGGGGTGGAATTAACATCAAGTATGTAGCAGTTGGGAACGAGCCATTTTTAAAATCCTACAATGGTTCATTCTTGAACATCACCCTCCCTGCATTACAGAACATTCAAAATGCCCTCAATGACGCAGGCCTAGGGGACTCCATAAAGGCCACAGTGCCCTTAAATGCTGATGTGTATGAGTCTCCACCAAACAACCCTGTGCCGTCAGCAGGAATATTTAGGCCAGATATAAGTGACCTAATGACCCAAATAGTGCAATTTTTGGCAAAGAACAATGCACCATTCACAGTAAACATTTACCCTTTCTTGAGCCTCTATGGGAATGATAATTTCCCCTTTGACTATGCCTTCTTTGATGGTGTGGCCAATCCCATAAATGATAATGGGGTTTCATACACAAATGTTTTTGATGCAAATTTTGATACCTTGGTCTCTGCCCTCGAAAAAGTAGGATATGGGAACATGCCAATTTTGGTAGGAGAGGTGGGGTGGCCCACAGATGGTGACAAAAATGCTAATGTAGGCAATGCATTTAGGTTCTATAATGGGCTTTTACCGAGGCTTGCAATAAACAAAGGGACCCCACTTAGGCCTGGATTTATTGAAGTTTACCTATTTGGGCTCATTGATGAGGATGCCAAGACCATTGCCCCAGGGAACTTTGAGAGACATTGGGGCATTTTTGGGTATGATGGGAAGCCCAAGTTTCCAATGGACCTTTCTGGAAAAGGCCAAAACAAGCTACTAGTTGGTGCACAAAATGTGCACTATCTTGAGCCAAACTGGTGCATGTTTAACCCTGATGCACAGGACCTAAGCAAACTTGCTGATAATATAAACTATGCATGCACCTTTGCTGATTGCACTGCACTTGGATATGGTTCTTCTTGCAACAACTTGGATGCCAATGGAAATGCCTCATATGCATTTAATATGTACTACCAGACACAGGATCAGAATTACATGGCCTGCAATTTTGAAGGCTTGGCAAGACTCACAACAAGCAATATTTCAACACCTACTTGCAATTTTATTGTTCAGATAAATCCTTCCTTGTCCTCTTCTTTAAGGCCCCCAATAGTAGCTTCCTTGTTTGTCACTCTACTACCCTTGATTCTATTTTTGTAG 1452 0.4325 MMMGKGWFLRLVMVIGVMGWCWWCVEGLGVNWGTQATHQLKADTVVEMLKDNGIQKVKLFDADESSMSALSGSGIEVMVAIPNNQLAEMNDYDRALQWVKKNVTRYNFRGGINIKYVAVGNEPFLKSYNGSFLNITLPALQNIQNALNDAGLGDSIKATVPLNADVYESPPNNPVPSAGIFRPDISDLMTQIVQFLAKNNAPFTVNIYPFLSLYGNDNFPFDYAFFDGVANPINDNGVSYTNVFDANFDTLVSALEKVGYGNMPILVGEVGWPTDGDKNANVGNAFRFYNGLLPRLAINKGTPLRPGFIEVYLFGLIDEDAKTIAPGNFERHWGIFGYDGKPKFPMDLSGKGQNKLLVGAQNVHYLEPNWCMFNPDAQDLSKLADNINYACTFADCTALGYGSSCNNLDANGNASYAFNMYYQTQDQNYMACNFEGLARLTTSNISTPTCNFIVQINPSLSSSLRPPIVASLFVTLLPLILFL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01392 483 SUPERFAMILY (Trans)glycosidases 28 347 IPR017853 -
Gma16g01392 483 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 5 465 IPR044965 GO:0004553|GO:0005975
Gma16g01392 483 Gene3D Glycosidases 27 355 - -
Gma16g01392 483 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 5 465 - -
Gma16g01392 483 SMART X8_cls 369 452 IPR012946 -
Gma16g01392 483 Pfam X8 domain 370 438 IPR012946 -
Gma16g01392 483 Gene3D - 366 462 - -
Gma16g01392 483 ProSitePatterns Glycosyl hydrolases family 17 signature. 263 276 IPR000490 GO:0004553|GO:0005975
Gma16g01392 483 Pfam Glycosyl hydrolases family 17 28 347 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01392 Gma-Chr16 32940307 32943305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01392 11 456 Miscellaneous Gene Families AT1G64760 73.497 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01392 - - gmx:102666963 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01392 16 32940307 32943305 Gma02g00645 02 6310921 6313500 GST
Gma16g00383 16 3993055 3996559 Gma16g01392 16 32940307 32943305 PCT
Gma16g01392 16 32940307 32943305 Gma16g00383 16 3993055 3996559 PCT