Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00383 ATGGAGAAAAACTGGTGTTTGAGATGGATTTTTGTGGTGGGGTTGATGTGTTTGAGTGTGGAAGGGATTGGTGTGAATTGGGGAACTCAAGCAACCCACAAGTTGCCACCAGACACAGTGGTTCAGATGTTGAAGGATAATGGGATTAAGAAAGTGAAGCTTTTTGATTCAGATGACTCCACCATGAGTGCTTTGGCTGGGACTGGGATTGAAGTCATGGTGGCTATCCCTAATAATCAGCTTGCTGAGATGAATGACTATGGCAGGGCCAAACAATGGGTCAAGAAAAATGTCACACGTTACAACTTCAATGGAGGAGTTAATGTCAAGTATGTAGCGGTCGGGAACGAGCCATTTTTAAAATCCTACAACAATTCATTCTTGAATATCACCCTCCCTGCACTGCAGAACATTCAAAATGCCCTTAATGAAGCAGGTCTTGGAGACAAAATAAAGGCTACAGTGCCCTTAAATGCTGATGTGTATCAGTCTCCAGAGAGTAATCCTGTTCCTTCTGCAGGAATATTTAGGCCTGATATCAGTGGTCTCATGACACAGATAGTGCAATTTCTCAGCAAGAATGGTGCCCCATTTACCGTGAACATTTACCCCTTCTTGAGCCTTTATGGTAACGACGATTTTCCTTTCAACTATGCCTTCTTCGACGGTGTGGACAATCCGGTAAACGATAACGGTACTCCATACACCAATGTCTTTGATGCAAATTTTGATACCTTGGTTGCTGCTCTCAAATCAGTTGGGTTTGGGGACCTGCCTATTTTGGTGGGAGAAGTAGGATGGCCTACTGAAGGGGACAAGAATGCCAACGCAGGCAATGCTTTGAGATTCTATAATGGCCTTCTGCCAAGGCTTGCAGCAAATAGAGGCACCCCACGCCGCCCTGGATACATTGAAGTTTATCTATTTGGACTCATCGACGAGGATGCCAAGAGCATTGCGCCAGGAAACTTCGAACGCCATTGGGGAATATTCAGATACGATGGACAACCTAAGTTTCCAATGGACCTTTCTGGTCAGAACCAAAACAAATTTCTCATAGGTGCACAGAACGTGAAATATCTTGCTCCTAGGTGGTGCATGTTTAATCCTGATGCCAAGGATCTCAGCAAACTTCCAGATAACATTAACTATGCTTGCACCTTTGGAGATTGCACCGCGCTTGGATATGGTTCTTCGTGCAACAATTTGGATGCAAATGGGAATGCCTCTTACGCGTTCAATATGTACTTCCAAGTGCAAAATCAGAACCCCATGGCATGCAATTTTCAAGGTTTGGCCAAGCTTACAACGGATAATATCTCAACACCCACTTGCAATTTTATCGTTCAGATAGTTAATTCTTCAGCCTCTTCTTTGATGATGCCCTCACTAGTTGCTATCTTGTTTGTTAGTTTATTCTTGATTCTGTTTTCTTAG 1437 0.4356 MEKNWCLRWIFVVGLMCLSVEGIGVNWGTQATHKLPPDTVVQMLKDNGIKKVKLFDSDDSTMSALAGTGIEVMVAIPNNQLAEMNDYGRAKQWVKKNVTRYNFNGGVNVKYVAVGNEPFLKSYNNSFLNITLPALQNIQNALNEAGLGDKIKATVPLNADVYQSPESNPVPSAGIFRPDISGLMTQIVQFLSKNGAPFTVNIYPFLSLYGNDDFPFNYAFFDGVDNPVNDNGTPYTNVFDANFDTLVAALKSVGFGDLPILVGEVGWPTEGDKNANAGNALRFYNGLLPRLAANRGTPRRPGYIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFPMDLSGQNQNKFLIGAQNVKYLAPRWCMFNPDAKDLSKLPDNINYACTFGDCTALGYGSSCNNLDANGNASYAFNMYFQVQNQNPMACNFQGLAKLTTDNISTPTCNFIVQIVNSSASSLMMPSLVAILFVSLFLILFS 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00383 478 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Gma16g00383 478 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 2 466 - -
Gma16g00383 478 Pfam X8 domain 365 433 IPR012946 -
Gma16g00383 478 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 2 466 IPR044965 GO:0004553|GO:0005975
Gma16g00383 478 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
Gma16g00383 478 Gene3D Glycosidases 21 351 - -
Gma16g00383 478 SMART X8_cls 364 447 IPR012946 -
Gma16g00383 478 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Gma16g00383 478 Gene3D - 361 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00383 Gma-Chr16 3993055 3996559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00383 9 475 Miscellaneous Gene Families AT1G64760 74.304 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00383 - - gmx:100815300 954.896
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00383 16 3993055 3996559 Gma16g01392 16 32940307 32943305 PCT
Gma16g00383 16 3993055 3996559 Gma02g00645 02 6310921 6313500 PCT
Gma16g01392 16 32940307 32943305 Gma16g00383 16 3993055 3996559 PCT
Gma02g00645 02 6310921 6313500 Gma16g00383 16 3993055 3996559 PCT