Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00645 ATGGGAAAAGGTTGGTTTTTTAGATGGGTTATGATGATTGGTGTGATGGGTTGGTGTGTGGCAGGGCTTGGGGTGAATTGGGGGACTCAAGCCACACACCAGTTGAGGGCAGACACAGTGGTTGAGATGTTGAAGGACAATGGGATTCAGAAGGTGAAGCTGTTTGATGCAGATGAGTCTAGCATGAGTGCTCTATCTGGCTCTGGGATTGAAGTCATGGTTGCCATTCCCAATAACCAACTTGCTGAGATGAATGACTATGATCGTGCTTTGCAGTGGGTCAAGAAGAATGTCACTCGGTACAACTTCAGGGGTGGAGTTAACATCAAGTATGTAGCAGTTGGGAACGAGCCATTTTTAAAATCCTACAATGGTTCATTCTTGAACATCACCCTCCCTGCATTACAGAACATTCAAAATGCACTCAATGATGCAGGCCTAGGGGACTCCATAAAGGCCACAGTACCCTTAAATGCTGATGTGTACGAGTCTCCACCGAACAGTCCTGTGCCCTCAGCAGGAATATTTAGGCCTGATATAAGTGACCTTATGACCCAAATAGTGCAATTTTTGGCAAAGAACAAAGCACCATTCACAGTCAACATTTACCCCTTCTTGAGCCTCTATGGGAATGACAATTTCCCCTTTGACTATGCCTTCTTTGATGGTGTGGCCAATCCCATAATTGATAATGGGGTTTCATACACCAATGTCTTTGATGCAAATTTTGACACCTTGGTCTCTGCCCTAAAAAAAGTAGGGTATGGGAACATGCCAGTTTTGGTAGGAGAGGTAGGGTGGCCCACAGATGGTGACAAAAATGCTAATGTAGGAAATGCTTTTAGGTTCTACAATGGGCTTCTACCAAGGCTTGCAATGAATAAAGGGACCCCGCTTAGGCCAGGATTTATTGAAGTTTACCTATTTGGGCTCATTGATGAGGATGCCAAGAACATTGCCCCAGGGAACTTTGAGAGACATTGGGGTATTTTTGGGTATGATGGGAAGCCCAAGTTTCCAATGGACCTTTCTGGAAAAGGCCAAAAGAAGGTACTAGTTGGTGCTCAAAATGTGCACTATCTTGAGCCAAATTGGTGCATGTTTAACCCTGATGCACAGGACCTAAGCAAACTTGCTGATAATATAAACTATGCTTGCACCCTTGCTGATTGCACTGCACTTGGATATGGTTCTTCTTGCAACAACTTGGATGCCAATGGAAATGCCTCATATGCATTTAATATGTACTACCAGACACAGGATCAGAATTACATGGCCTGCAATTTTGAAGGCTTGGCAAGGCTTACAACAAGCAATATTTCAACACCTACTTGCAATTTTATTGTTCAGATAAATCCTTCCTTGTCCTCTTCTTTGAGGCCCCAAATAGTAGCTTTCTTGTTTGTCACTCTACTACCCTTCATTCTATTTTTGTAG 1437 0.4349 MGKGWFFRWVMMIGVMGWCVAGLGVNWGTQATHQLRADTVVEMLKDNGIQKVKLFDADESSMSALSGSGIEVMVAIPNNQLAEMNDYDRALQWVKKNVTRYNFRGGVNIKYVAVGNEPFLKSYNGSFLNITLPALQNIQNALNDAGLGDSIKATVPLNADVYESPPNSPVPSAGIFRPDISDLMTQIVQFLAKNKAPFTVNIYPFLSLYGNDNFPFDYAFFDGVANPIIDNGVSYTNVFDANFDTLVSALKKVGYGNMPVLVGEVGWPTDGDKNANVGNAFRFYNGLLPRLAMNKGTPLRPGFIEVYLFGLIDEDAKNIAPGNFERHWGIFGYDGKPKFPMDLSGKGQKKVLVGAQNVHYLEPNWCMFNPDAQDLSKLADNINYACTLADCTALGYGSSCNNLDANGNASYAFNMYYQTQDQNYMACNFEGLARLTTSNISTPTCNFIVQINPSLSSSLRPQIVAFLFVTLLPFILFL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00645 478 SMART X8_cls 364 447 IPR012946 -
Gma02g00645 478 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Gma02g00645 478 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 3 460 IPR044965 GO:0004553|GO:0005975
Gma02g00645 478 Gene3D Glycosidases 22 351 - -
Gma02g00645 478 Pfam X8 domain 365 433 IPR012946 -
Gma02g00645 478 Gene3D - 361 457 - -
Gma02g00645 478 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
Gma02g00645 478 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 3 460 - -
Gma02g00645 478 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00645 Gma-Chr2 6310921 6313500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00645 9 451 Miscellaneous Gene Families AT1G64760 73.589 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00645 - - gmx:100788417 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00645 02 6310921 6313500 Gma02g00645 02 6310921 6313500 ECH
Gma16g01392 16 32940307 32943305 Gma02g00645 02 6310921 6313500 GST
Gma16g00383 16 3993055 3996559 Gma02g00645 02 6310921 6313500 PCT
Gma02g00645 02 6310921 6313500 Gma16g00383 16 3993055 3996559 PCT