Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00242 ATGTTGGAGAAAGTTGAAGAATTTAACATAGAGAGGGTGATGGAGGAATTTGAGAGGGTGACAAAGGATGCTGAGAGGATTCAAAAGGAAACCCTGAAGAGGATTTTGGAAGATAATGCTTCTGCTGAGTACTTGCTGAATTTGGGGTTGAATGGGAGGACTGATCCTGAGAGCTTCAAGGCCTTTGTTCCACTTGTTACTCACAAAGATTTAGAGCCTTATATCAATAGAATACTTGATGGTGATTTTTCTTCTGTTCTCACTGGCAAACCGATCACAACCATGTCTTTGAGTTCTGGGACCACTCAGGGAAAGCCAAAATATGTACCATGGAATGATAAACTGTTTGACACCACATTGCAGATATACCACACCTCTTTTGCCTTCAGAAACAGGGAATTTCCCATAAACGGCGGCAAGGCCTTGGGCTTTATCTACAGCAGCAAGCAGTTCAAAACCAAAGGGGGTGTGCTAGCAGGAACTGCCACAACCAATGTGTTCCGAAACCCAGGTTTCCGGCATGCGATGAAGACGACTCAGTCCCCATTTTGCAGCCCTGATGAAGTCATATTTGGTCCTGATTTTCACCAATCCTTGTACTGCCACCTCTTGTGTGGCCTAATCTTCAGGGAAGAAGTTCAGTTGGTGTCTTCCACATTTGCACACAGCATTGTCTATGCTTTCAGGACTTTTGAGCAAGTTTGGGAGGAGCTTTGTGTTGATATCAAGGAAGGTGTCCTTAACAGCAAGGTTACAGTGCCCTCCGTTAGGGCAGCAATGTCTAAGCTCCTAAAACCTGACCCTGAACTAGCCAATTTGATCCACAGCAAGTGCATGGGGCTTAGCAACTGGTATGGCCTAATACCAGAGCTTTTCCCCAATGTTAAGTATGTTCATGGCATCATGACTGGGTCAATGGAACCTTATTTGAAAAAATTGAGGCATTATGGTGGAGAGTTGCCTTTGTTGACTTCTGACTATGGATCTTCTGAAGGGTGGATAGGAACAAATGTGAAACCAACAGTGCCACCTGAATTGGCCACCTACACTGTGCTTCCTCAAATTGGCTACTTTGAATTCATCCCTCTGAGAGAGCTAGAAGGAGCTAAGGGAGATTCTAGTTTCCTTTGTATGGAAGCTAAGCCTGTGGGGCTCACTGAGGTGAAAATTGGTGAAGAATATGAGATTGTCGTCACCAATCCAGCAGGCTTGTACAGGTACCGGCTAGGTGATGTGGTCAAGGTTATGGGGTTCCATAATTCAGCTCCAGAAATAAAGTTTGTTCGGCGTAGCAACCTTCTTCTAACCATCAACATAGACAAGAACACAGAGAAAGATCTGCAGTTGGCTGTGGAAGCAGCATCAGAATTGTTGGCAGAGGAGAAATTGGAAGTTGTTGACTACACTAGCCACATAGATTTGTCAAAGGAGCCAGGACACTATGTAATCTTCTGGGAAATAAGTGGTGAAGCAAGTGAAGAAGTGCTTGGTGGATGCTGCAACGGAATGGACAAGTCTTTTGTTGATGCTGGTTACACCAGCTCTCGCAAAGTCAACTGCATCGGGGCCCTCGAGCTCCGACTTGTTCGTAGAGGAACATTCCAGAAGATACTTGAGCACTCCCTTGCACTAGGAGCTGCTGTGAGCCAGTTCAAGACACCAAGATGTGTAGGCCCTACAAACACCAAAGTGTTGCAAATATTGAATGAAAATGTTGTCAAGAGCTATCTCAGCACTGCCTTCAATTGA 1749 0.4505 MLEKVEEFNIERVMEEFERVTKDAERIQKETLKRILEDNASAEYLLNLGLNGRTDPESFKAFVPLVTHKDLEPYINRILDGDFSSVLTGKPITTMSLSSGTTQGKPKYVPWNDKLFDTTLQIYHTSFAFRNREFPINGGKALGFIYSSKQFKTKGGVLAGTATTNVFRNPGFRHAMKTTQSPFCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIVYAFRTFEQVWEELCVDIKEGVLNSKVTVPSVRAAMSKLLKPDPELANLIHSKCMGLSNWYGLIPELFPNVKYVHGIMTGSMEPYLKKLRHYGGELPLLTSDYGSSEGWIGTNVKPTVPPELATYTVLPQIGYFEFIPLRELEGAKGDSSFLCMEAKPVGLTEVKIGEEYEIVVTNPAGLYRYRLGDVVKVMGFHNSAPEIKFVRRSNLLLTINIDKNTEKDLQLAVEAASELLAEEKLEVVDYTSHIDLSKEPGHYVIFWEISGEASEEVLGGCCNGMDKSFVDAGYTSSRKVNCIGALELRLVRRGTFQKILEHSLALGAAVSQFKTPRCVGPTNTKVLQILNENVVKSYLSTAFN 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00242 582 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 582 IPR004993 -
Gma16g00242 582 Coils Coil 10 30 - -
Gma16g00242 582 Pfam GH3 auxin-responsive promoter 16 557 IPR004993 -
Gma16g00242 582 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00242 Gma-Chr16 2614898 2617958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00242 14 579 EF-hand Containing Proteins AT1G23160 39.243 4.90e-138 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00242 K14506 - gmx:100806209 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00242 16 2614898 2617958 Gma16g00242 16 2614898 2617958 ECH
Gma07g00541 07 5220993 5224149 Gma16g00242 16 2614898 2617958 GST
Gma19g02392 19 52490640 52495611 Gma16g00242 16 2614898 2617958 PCT
Gma03g02353 03 48703248 48708647 Gma16g00242 16 2614898 2617958 PCT
Gma16g00242 16 2614898 2617958 Gma19g02392 19 52490640 52495611 PCT
Gma16g00242 16 2614898 2617958 Gma03g02353 03 48703248 48708647 PCT