Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00541 ATGTTGGAGAAAGTTGAAGAATTTAACACGGAGAGGATGATGGAGGAATTTGAGAGGGTGACAAAGGATGCTGAGAGGATTCAAAGGGAAACCCTGAAGAGGATTTTGGAAGATAATGCTTCTGCTGAGTACTTGCTGAATTTGGGCTTGAATGGGAGGACGGATCCTGAGAGTTTCAAGGCCTTTGTTCCACTTGTTACTCATAAAGATTTGGAGCCTTATATCAATAGAATAATTGATGGTGATTTTTCTTCTGTTCTCACTGGCAAACCCATCACAACCATGTCTTTGAGTTCTGGCACTACTCAGGGAAAGCCAAAATATGTACCATGGAATGATGAATTGTTTGACACCACATTGCAGATATATCACACCTCTTTTGCCTTCAGAAACAGGGAATTTCCCATAAACAATGGCAAGGCCTTGGGCTTTATCTACAGCAGCAAGCAGTTCAAAACCAAAGGGGGTGTGCTAGCAGGAACTGCCACAACCAATGTGTTCCGTAACCCGGGGTTCCAGCATGCGATGAAGGCGATTCAGTCCCCACTTTGCAGCCCTGATGAAGTCATATTTGGTCCTGATTTTCACCAATCCTTGTACTGCCACCTCTTGTGTGGCCTAATCTTCAGGGAAGAAGTTCAGTTGGTGTCTTCCATATTTGCACACAGCATTGTCTATGCTTTTAGGACCTTTGAGCAAGTTTGGGAGGAGCTTTGTGTTGATATCAAGGAAGGTGTCCTTAACAGCAAGGTCACAGTGCCCTCCATTAGGGAAGCCATGTCTAAGCTCCTAAAACCTGACCCTGAGCTGGCCAACTTGATCCACAACAAGTGCATGGGGCTTAGCAACTGGTATGGCCTAATACCAGAGCTTTTCCCCAATGTTAAGTATGTTCATGGGATCATGACTGGGTCAATGGAACCTTATTTGAGAAAGTTGAGGCATTATGCTGGAGAGTTGCCTTTGTTGACTTCTGACTATGGATCTTCTGAAGGGTGGATAGGAACAAATGTGAAACCAACAGTACCACCTGAATTGGCCACCTACACTGTGCTTCCTCAAATTGGCTACTTTGAATTCATCCCTTTGAGAGAGCTAGAGGAAATTAAGGGAGATGCTAGTTTCCTTTGTATGGAGCCTAAGCCTGTGGGGCTCACTGAGGTGAAAGTTGGTGAGGAGTATGAGATTGTCATCACTAATCCAGCAGGCTTGTACCGGTACCGACTTGGTGATGTGGTTAAGGTTATGGGGTTCCATAATTCAGCTCCAGAAATAAAGTTCGTTCGGCGTAGCAATCTTCTGCTTAGCATCAACATAGACAAGAACACAGAGAAAGATCTTCAATTGGCTGTGGAATCAGCATCACAATTGTTGGCAGAGGAGAAATTGGAAGTAGTTGACTACACTAGCCACATAGATTTATCCAAAGAGCCAGGGCACTATGTAATCTTCTGGGAAATAAGTGGTGAAGCAAGTGAAGAAGTGCTTGGTGGATGCTGCAACTGTTTGGACAAGTCTTTTGTTGATGCTGGCTACACAAGCTCACGCAAAGTCAACTGCATAGGTGCCCTCGAACTCCGAGTTGTTCGGAGAGGAACATTCCAGAAGATACTTGAGCATTCCCTTGCACTAGGAGCTGCTTACTGCCTTCAATTGAGTTTCCAAGCACACCTCTGTTGTTACCTTCATTATCATCACCTCCTCTTGCACCCTTTTACAATATAA 1725 0.4458 MLEKVEEFNTERMMEEFERVTKDAERIQRETLKRILEDNASAEYLLNLGLNGRTDPESFKAFVPLVTHKDLEPYINRIIDGDFSSVLTGKPITTMSLSSGTTQGKPKYVPWNDELFDTTLQIYHTSFAFRNREFPINNGKALGFIYSSKQFKTKGGVLAGTATTNVFRNPGFQHAMKAIQSPLCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSIFAHSIVYAFRTFEQVWEELCVDIKEGVLNSKVTVPSIREAMSKLLKPDPELANLIHNKCMGLSNWYGLIPELFPNVKYVHGIMTGSMEPYLRKLRHYAGELPLLTSDYGSSEGWIGTNVKPTVPPELATYTVLPQIGYFEFIPLRELEEIKGDASFLCMEPKPVGLTEVKVGEEYEIVITNPAGLYRYRLGDVVKVMGFHNSAPEIKFVRRSNLLLSINIDKNTEKDLQLAVESASQLLAEEKLEVVDYTSHIDLSKEPGHYVIFWEISGEASEEVLGGCCNCLDKSFVDAGYTSSRKVNCIGALELRVVRRGTFQKILEHSLALGAAYCLQLSFQAHLCCYLHYHHLLLHPFTI 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00541 574 Coils Coil 10 30 - -
Gma07g00541 574 Pfam GH3 auxin-responsive promoter 16 546 IPR004993 -
Gma07g00541 574 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 547 - -
Gma07g00541 574 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 547 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00541 Gma-Chr7 5220993 5224149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00541 14 547 EF-hand Containing Proteins AT1G23160 38.616 1.08e-125 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00541 K14506 - gmx:100813492 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00541 07 5220993 5224149 Gma07g00541 07 5220993 5224149 ECH
Gma07g00541 07 5220993 5224149 Gma16g00242 16 2614898 2617958 GST
Gma19g02392 19 52490640 52495611 Gma07g00541 07 5220993 5224149 PCT
Gma03g02353 03 48703248 48708647 Gma07g00541 07 5220993 5224149 PCT
Gma07g00541 07 5220993 5224149 Gma19g02392 19 52490640 52495611 PCT
Gma07g00541 07 5220993 5224149 Gma03g02353 03 48703248 48708647 PCT