Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02353 ATGTTAGAGAAAGTGGAGGAGTTTAACATGGATAAAGTTATACAAGAGTTTGAATTATTGACAAGGGATGCAGAAAGAGTTCAGAGGGAAACACTCAAGAGGATTTTGGAGGATAACGCATCAGCAGAGTACTTGCAGAGTTTGGGTCTCAATGGAAGAACTGACCCTGAGAGTTTCAAGGCCTGTGTTCCAATGGTCACCCACAAAGAATTGGAACCTTATATCTACAGAATTATTGATGGTGATGCTTCTCCTATTCTCACTGGAAAACCCATCACAACCATGTCCTTAAGTTCTGGCACTACCCAGGGGAAACCAAAGTATGTACCTTGGAATGATGAATTGTATGAAACCACAATGCAGATATACCAGACCTCTTTTGCCTTTAGAAACAGGGAGTTTCCTATAAAAAATGGGAAGGCTTTAAGCTTTATATACGGTAGCAAACAGTTGAAAACAAAGGGGGGTCTGGCGGCTAGAACTGCCACAAGCAACGTGTTCTGTAGTGCTGGTTACAAGTGTGCAATGAGGGCACTCCAATCCCAATGCTGCAGCCCGGATGAAGTGATATTTGGTCCTGATTTTTTCCAATCACTGTACTGCCATCTGCTGTGTGGTCTGATTTTCCGGGAGGAAGTTGAGTTTGTATCTTCCACATTTGCACATAGCATTGTCCATGCTTTTAGAACCTTTGAACAAGTGTGGGAAGAGCTGTGCAATGATATCAGAGAAGGGGTTCTCACCAGAAATGTCACCGTTCCTTCCATTCGAATGGCCATGTCTAAACTGCTCAAACCAAACCCTGAATTAGCAAACGCGATCCACAAAAAATGCACGGGATTGAGCAACTGGTACGGGTTGATACCGGAGCTTTTTCCCAATGCAAAGTATATTTATGGCATCATGACCGGGTCGATGGAACCTTATTTGAAAAAAATGAGACATTATGCCGGGGAGCTGCCTTTGTTGACTGCTGACTATGGATCCTCTGAGGGATGGATAGCAGCAAATGTGAACCCACAACTTCCTCCCGAGTATGCCACTTATGCCGTGCTTCCTCACATTGGTTACTTTGAATTCATTCCTCTCTTAGAGCTTGAGAACACCAAGCCTCTGGGCCTGACTCAAGTCAAGGTTGGTCAAGAGTATGAAATTGTTATGACAAATCCAGCAGGTTTATACCGTTATAGATTGGGGGATGTGGTGAAGGTTATGGGATTCCACAATTCAACTCCAGAACTCAAGTTTATTCGAAGGAGCAGTCTTCTGCTCAACATTAACATCGACAAGAACACTGAGAAGGATTTACAATTAGCCGTGGAAGCTGCAGGGAAGTTGCTAGCAGAGGAGAAACTGGAAGTAGTTGACTTCAGTAGCCAGGTTGATTTATCCAAAGAACCAGGGCACTATGTCATCTTCTGGGAAATCAGCGGAGACGCGAGCCAAGAACTACTCCATGAATGCTGTAACTGTTTGGACAAGTCTTTCGTTGATGCAGGCTACACCAGTTCGCGCAAAGTGAACTGCATTGGTGCCCTCGAACTACGACTTGTTCGGAGAGGAACATTCCAGAAGATTCTTGATCATTACCTAGGACTAGGAACCGCTGTTAGTCAGTACAAGACACCAAGATGTGTTGGTCCTACAAACACCAGAGTGTTGCAAATCTTGAGTGAAAATGTTGTCAACAACTATCTCAGTACCGCTTTCAATTGA 1716 0.4406 MLEKVEEFNMDKVIQEFELLTRDAERVQRETLKRILEDNASAEYLQSLGLNGRTDPESFKACVPMVTHKELEPYIYRIIDGDASPILTGKPITTMSLSSGTTQGKPKYVPWNDELYETTMQIYQTSFAFRNREFPIKNGKALSFIYGSKQLKTKGGLAARTATSNVFCSAGYKCAMRALQSQCCSPDEVIFGPDFFQSLYCHLLCGLIFREEVEFVSSTFAHSIVHAFRTFEQVWEELCNDIREGVLTRNVTVPSIRMAMSKLLKPNPELANAIHKKCTGLSNWYGLIPELFPNAKYIYGIMTGSMEPYLKKMRHYAGELPLLTADYGSSEGWIAANVNPQLPPEYATYAVLPHIGYFEFIPLLELENTKPLGLTQVKVGQEYEIVMTNPAGLYRYRLGDVVKVMGFHNSTPELKFIRRSSLLLNINIDKNTEKDLQLAVEAAGKLLAEEKLEVVDFSSQVDLSKEPGHYVIFWEISGDASQELLHECCNCLDKSFVDAGYTSSRKVNCIGALELRLVRRGTFQKILDHYLGLGTAVSQYKTPRCVGPTNTRVLQILSENVVNNYLSTAFN 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02353 571 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 571 IPR004993 -
Gma03g02353 571 Coils Coil 10 30 - -
Gma03g02353 571 Pfam GH3 auxin-responsive promoter 16 546 IPR004993 -
Gma03g02353 571 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02353 Gma-Chr3 48703248 48708647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02353 14 568 EF-hand Containing Proteins AT1G23160 38.772 3.86e-135 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02353 K14506 - gmx:100777944 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02353 03 48703248 48708647 Gma03g02353 03 48703248 48708647 ECH
Gma19g02392 19 52490640 52495611 Gma03g02353 03 48703248 48708647 GST
Gma03g02353 03 48703248 48708647 Gma07g00541 07 5220993 5224149 PCT
Gma03g02353 03 48703248 48708647 Gma16g00242 16 2614898 2617958 PCT
Gma07g00541 07 5220993 5224149 Gma03g02353 03 48703248 48708647 PCT
Gma16g00242 16 2614898 2617958 Gma03g02353 03 48703248 48708647 PCT