LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma15g01596	ATGGCGAGTCTGCTTCGGAACGCTAACACATCCCTCCTCAAACGTTCTCTCTTCCACTCCGACCTTCTAACGCGCTTTTGCTTTAAACCGGGAGTGTTGGGCACGTCTCAAGTTTTAAGCTTTTCAACTCGTAAAAGGAGGTCTAAATCAGATGGAAGTGACTCAGGTGAAGAGAACATGTCTAAGAAAGATATGGCATTACAACAAGCTATTGATCAAATCACATCTGCATATGGAAAGGGATCTATCATGTGGCTTGGTCGTTCCATGGCACCAAAAAATGTACCTGTGGTGTCTACTGGTTCTTTTGCTCTGGATATAGCACTTGGGGTTGGAGGTCTTCCAAAGGGGCGTGTTGTGGAAATATTTGGTCCAGAGGCTTCTGGGAAAACAACTCTTGCTTTGCATATGATTGCGGAAGCACAAAAGCTAGGAGGCTACTGTGCCTTTGTTGATGCTGAGCATGCACTTGATAAGACACTTGCAGAGTCAATTGGTGTAGATACTAAGAACTTGCTTCTCTCACAACCCGATTGTGGTGAACAAGCACTTAGCCTTGTGGATACCTTAATCCGGAGTGGTTCAGTTGATGCAATTGTTGTTGATAGTGTAGCTGCTCTTGTTCCTAAAGGCGAGCTTGATGGGGAGATGGGTGATGCTCACATGGCAATGCAGGCTAGGTTGATGAGCCAGGCTCTTCGGAAATTGTGCCACTCCTTGTCACTTTCACAGTGTATATTAGTTTTTATAAACCAGGTGAGGTCAAAAATTTCTACTTTTGGGGGATATGGTGGGCCCACTGAAGTTACTTGTGGTGGTAATGCACTGAAGTTTTATGCTTCTGTGCGGCTAAATATCAAAAGAATTGGGTTTGTCAAGAAGGGTGAAGAGACTTTAGGAAGTCAGGTTCTTGTCAAGGTTGTGAAGAACAAGCATGCCCCTCCATTTAAAACTGCACAGTTTGAGATTGAGTTCGGCAAGGGTATAAGTAGAGAAGCGGAGATCATAGAGTTGAGCGTAAAATACAAAATCATAAAGAAGAGTGGTTCATTTTTTGAATATAATGGCCGGAATTTCCATGGCAAGGATGCTCTAAAGAGATTCCTGGCGGAGAGTGATGGAGTACAAGAATTAGCAACAATGCTCAGGGAGAAGATTCTTAATGCTGAGCCAGAACTGGAGCAAGAGGAGCAGGAGATGATTGGAGATGTTATGGAACTAATGGAAAAAACGCTTGATTCCACTGATGAAGCAGCTTCTCGTGCTCCTGCCCCTGTTGCTGCAGAAGCTTAA	1293	0.4416	MASLLRNANTSLLKRSLFHSDLLTRFCFKPGVLGTSQVLSFSTRKRRSKSDGSDSGEENMSKKDMALQQAIDQITSAYGKGSIMWLGRSMAPKNVPVVSTGSFALDIALGVGGLPKGRVVEIFGPEASGKTTLALHMIAEAQKLGGYCAFVDAEHALDKTLAESIGVDTKNLLLSQPDCGEQALSLVDTLIRSGSVDAIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLCHSLSLSQCILVFINQVRSKISTFGGYGGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEETLGSQVLVKVVKNKHAPPFKTAQFEIEFGKGISREAEIIELSVKYKIIKKSGSFFEYNGRNFHGKDALKRFLAESDGVQELATMLREKILNAEPELEQEEQEMIGDVMELMEKTLDSTDEAASRAPAPVAAEA	430

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma15g01596	430	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	67	329	IPR027417	-
	Gma15g01596	430	PRINTS	RecA protein signature	152	181	IPR013765	GO:0003697\|GO:0005524\|GO:0006281
	Gma15g01596	430	PRINTS	RecA protein signature	186	215	IPR013765	GO:0003697\|GO:0005524\|GO:0006281
	Gma15g01596	430	PRINTS	RecA protein signature	224	253	IPR013765	GO:0003697\|GO:0005524\|GO:0006281
	Gma15g01596	430	PRINTS	RecA protein signature	272	300	IPR013765	GO:0003697\|GO:0005524\|GO:0006281
	Gma15g01596	430	PRINTS	RecA protein signature	305	334	IPR013765	GO:0003697\|GO:0005524\|GO:0006281
	Gma15g01596	430	PRINTS	RecA protein signature	358	375	IPR013765	GO:0003697\|GO:0005524\|GO:0006281
	Gma15g01596	430	TIGRFAM	tigrfam_recA: protein RecA	63	384	IPR013765	GO:0003697\|GO:0005524\|GO:0006281
	Gma15g01596	430	ProSiteProfiles	RecA family profile 2.	260	334	IPR020587	GO:0003677\|GO:0005524\|GO:0006259\|GO:0008094
	Gma15g01596	430	PANTHER	RECA	1	412	IPR013765	GO:0003697\|GO:0005524\|GO:0006281
	Gma15g01596	430	SUPERFAMILY	RecA protein, C-terminal domain	330	375	IPR023400	-
	Gma15g01596	430	CDD	recA	62	389	IPR013765	GO:0003697\|GO:0005524\|GO:0006281
	Gma15g01596	430	ProSitePatterns	recA signature.	275	283	IPR020584	GO:0003677\|GO:0005524\|GO:0006259\|GO:0008094
	Gma15g01596	430	Hamap	Protein RecA [recA].	63	390	IPR013765	GO:0003697\|GO:0005524\|GO:0006281
	Gma15g01596	430	PANTHER	REPAIR PROTEIN RECA, PUTATIVE-RELATED	1	412	-	-
	Gma15g01596	430	SMART	AAA_5	116	290	IPR003593	-
	Gma15g01596	430	ProSiteProfiles	RecA family profile 1.	94	253	IPR020588	GO:0003677\|GO:0005524\|GO:0006281\|GO:0140664
	Gma15g01596	430	Gene3D	-	93	392	IPR027417	-
	Gma15g01596	430	Pfam	recA bacterial DNA recombination protein	66	330	IPR013765	GO:0003697\|GO:0005524\|GO:0006281

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma15g01596	Gma-Chr15	15681937	15691750	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma15g01596	K03553		-	gmx:100807627	785.023

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma15g01596	15	15681937	15691750	Gma15g01596	15	15681937	15691750	ECH
	Gma15g01596	15	15681937	15691750	Gma09g00583	09	6375694	6383104	GST
	Gma17g00509	17	4184067	4190296	Gma15g01596	15	15681937	15691750	PCT
	Gma13g00854	13	22793533	22800746	Gma15g01596	15	15681937	15691750	PCT
	Gma15g01596	15	15681937	15691750	Gma17g00509	17	4184067	4190296	PCT
	Gma15g01596	15	15681937	15691750	Gma13g00854	13	22793533	22800746	PCT