Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00854 ATGGCGAGACTGCTTCGGGATACTTTCCTTCTCACACGCCCCCCATTTATCCCCAAGGGTTTTAAACTAGGAATAATTGGCACTTCTCAGATTTTGAGCTTTTCGTCTAAAGGTAGAAGGCGCTCTAAATCTGATGGAAGTGACTCAGATGAAGAGAACATGTCTAAGAAAGAGTTGGCCCTTCAACAAGCTCTTGATCAGATCACTTCCGCATTTGGAAATGGATCCATCATGTGGCTTGGTCGTTCTGTCTCACCAAAAAGTTTACCTGTTGTGTCTACTGGTTCTTTTGCTCTTGATGTAGCACTAGGACATGTTGTGGAAATATATGGTCCAGAGGCTTCTGTAAAAACAATTCTTGCTTTACATGTGATTGCAGAGGCACAGAAGCAAGGAGGCTATTGTGTCTTTGTTGATGCTGAGCATGCCCTTGATAAGAAACTTGCAGAGTCTATTGGTGTGAATACAACGAACTTGCTTCTCTCCCAACCTGATTGTGGTGAACAAGCACTAAGTCTTGTGGATACCTTAATCCGTAGTGGTTCAGTTGATGTAATTGTTGTTGATAGTGTGGCTGCTCTTGTTCCTAAAGGTGAGCTTGATGGTGAAATGGGCCATGCTCATATGGCAATGCAGGCTAGGTTGATGAGCCAGGCTCTTCGAAAATTGAGCCATTGCCTTGTCACCTTCTCAATGTATATTAATTTTTATAAACCAGGTGAGAGAATAGGGTTTGTCAAGAAGGGTGAAGAGATTTTAGGAAGTCAGGTTCTTGTCAAGGTTGTGAAGAACAAGCTTGTCCCTCCATTTAAAATTGCCGAGTTTGAGCTTCAATTTGGCAAGGGTATAAGCAAAGAAACAGAGATTATAGATTTGAGCGTAAAAAACAAACTCATCTCAAAGGCTGGTGCAATGTTTTACTATAATGAACAGAGTTTCCGTGGTAAGGATGCCCTAAAGAATTTTCTGGCTGAGAATCAAAGTGCATTAGAAGAACTTGAAATGAAACTCAGGGAGAAGCTTCTTAATGCTGAGACAGAGAAGATGTGGGATGTAATTAATGGAGATGTTAGAGAAGCAATTGCAACAGTTGATTCTACTGACGAAGAAGCTGCAGCTATAGTTGAAGCATGA 1134 0.4145 MARLLRDTFLLTRPPFIPKGFKLGIIGTSQILSFSSKGRRRSKSDGSDSDEENMSKKELALQQALDQITSAFGNGSIMWLGRSVSPKSLPVVSTGSFALDVALGHVVEIYGPEASVKTILALHVIAEAQKQGGYCVFVDAEHALDKKLAESIGVNTTNLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELDGEMGHAHMAMQARLMSQALRKLSHCLVTFSMYINFYKPGERIGFVKKGEEILGSQVLVKVVKNKLVPPFKIAEFELQFGKGISKETEIIDLSVKNKLISKAGAMFYYNEQSFRGKDALKNFLAENQSALEELEMKLREKLLNAETEKMWDVINGDVREAIATVDSTDEEAAAIVEA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00854 377 MobiDBLite consensus disorder prediction 38 56 - -
Gma13g00854 377 ProSiteProfiles RecA family profile 1. 88 234 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Gma13g00854 377 Coils Coil 316 347 - -
Gma13g00854 377 ProSiteProfiles RecA family profile 2. 242 288 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Gma13g00854 377 Pfam recA bacterial DNA recombination protein 60 230 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gma13g00854 377 Pfam recA bacterial DNA recombination protein 242 284 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gma13g00854 377 PANTHER REPAIR PROTEIN RECA, PUTATIVE-RELATED 241 368 - -
Gma13g00854 377 PANTHER RECA 241 368 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gma13g00854 377 SUPERFAMILY RecA protein, C-terminal domain 284 340 IPR023400 -
Gma13g00854 377 PRINTS RecA protein signature 139 168 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gma13g00854 377 PRINTS RecA protein signature 312 329 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gma13g00854 377 PRINTS RecA protein signature 211 240 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gma13g00854 377 PRINTS RecA protein signature 259 288 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gma13g00854 377 PRINTS RecA protein signature 173 202 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gma13g00854 377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 283 IPR027417 -
Gma13g00854 377 PANTHER REPAIR PROTEIN RECA, PUTATIVE-RELATED 1 233 - -
Gma13g00854 377 PANTHER RECA 1 233 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gma13g00854 377 Gene3D - 240 353 IPR027417 -
Gma13g00854 377 Gene3D - 87 238 IPR027417 -
Gma13g00854 377 MobiDBLite consensus disorder prediction 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00854 Gma-Chr13 22793533 22800746 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00854 K03553 - gmx:100817894 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00854 13 22793533 22800746 Gma13g00854 13 22793533 22800746 ECH
Gma17g00509 17 4184067 4190296 Gma13g00854 13 22793533 22800746 GST
Gma13g00854 13 22793533 22800746 Gma15g01596 15 15681937 15691750 PCT
Gma13g00854 13 22793533 22800746 Gma09g00583 09 6375694 6383104 PCT
Gma15g01596 15 15681937 15691750 Gma13g00854 13 22793533 22800746 PCT
Gma09g00583 09 6375694 6383104 Gma13g00854 13 22793533 22800746 PCT