Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01587 ATGACTGAAACAGCAGAATCTTCAGCTTACGGTGTGATGGCAAGTTGGTTCACACCCTCGTGTCTATTCCTCTTCATCAACCTCGTCATCGGCACCATCGCCATCATCTCTCGTTTCGCCAACACGACCAAAAGACAACACCAACTCGTCCGTTCTCCCTCTTTGCTAGAAAGGCTTGCGTCTCTCAACCTTTGTTATCACAAACAATATGAACCAACAACAACAACATTGCTTCACAGCCATGTGAACCCGGTCCAGAGTCGGGATGAATCCAGACTTGATAGGGTTAGGTCTTTCAATCTCGATTTTTATAACGTGGATAATATTGAAAGACCTGACCCAATTGAAAATTCTGACTCACCCCAACTAGACCGGGTTCCTTCCTCATCTTTGGGTCAGGTCAAGTCTTTCAATCTTAATATCTATAAATCAGAGATTGAAAGACTTGACCTAGTCCATAGGCCTGACTCATCCCAAATAGGCCGGGTTTCCTCCACGTCTTTGTTGGACCGAGTCAGGTCATTTAATCTCAACTTTAATAAAGTTGAGATTGAAAAGTCTAGCCGGGTCCAACAGCAAGTGACCCGTGCTCCCTCGATACTCGAGCGGCTTAAGTCGTCCTTGTCATTTGACAGATCGATGTCAGTGACCGAGCCTGAATCCGAAGTTACAGGTGGTGGAGAGTTGGTGGAGGAAACtgaagaagaaggggtggatgcaaaggctgatgatttcatcaataggtttaggcagcaactgaggttgcaaaggcttgactctattaTACGTTACAGGGATATGCTCAAACGATACTAA 816 0.4081 MTETAESSAYGVMASWFTPSCLFLFINLVIGTIAIISRFANTTKRQHQLVRSPSLLERLASLNLCYHKQYEPTTTTLLHSHVNPVQSRDESRLDRVRSFNLDFYNVDNIERPDPIENSDSPQLDRVPSSSLGQVKSFNLNIYKSEIERLDLVHRPDSSQIGRVSSTSLLDRVRSFNLNFNKVEIEKSSRVQQQVTRAPSILERLKSSLSFDRSMSVTEPESEVTGGGELVEETEEEGVDAKADDFINRFRQQLRLQRLDSIIRYRDMLKRY 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01587 271 Pfam Domain of unknown function (DUF4408) 8 39 IPR025520 -
Gma15g01587 271 PANTHER DUF4408 DOMAIN PROTEIN 8 270 - -
Gma15g01587 271 Pfam Cotton fibre expressed protein 236 270 IPR008480 -
Gma15g01587 271 MobiDBLite consensus disorder prediction 214 234 - -
Gma15g01587 271 PANTHER COTTON FIBER (DUF761) 8 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01587 Gma-Chr15 15490816 15492236 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01587 - - gmx:102670321 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01587 15 15490816 15492236 Gma15g01587 15 15490816 15492236 ECH
Gma15g01587 15 15490816 15492236 Gma09g00575 09 6208104 6209489 GST
Gma13g00844 13 22714530 22715693 Gma15g01587 15 15490816 15492236 PCT
Gma15g01587 15 15490816 15492236 Gma13g00844 13 22714530 22715693 PCT