Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00575 ATGACTGAAACATCAGAAGCTTCAGTTTACGGTGTGATGGCAAGTTGGCTCACACCCTCCAATCTATTCATTTTCATCAATCTCGTCATTGGAACCATCGCCATCTCCTCTCGTTTCGCCAACACGACCAAAAGACAACACCAGCTCGTCCGTTCTCCTTCTTTGCTAGAAAGGCTTGCGTCCTTTAACCTTTGTTATCACAAACATGAACcaacaacaaggatgatgacgacgacaacaacaatgtttcaCAGAGTTGTGGACCCAGTCGAGCGTCTGGATGAATTCAGACTCGACCAGGTCCCCTCCTCGTCCTTGTTGGACAGGGTTAGGTCTTTCAACCTGGGGTTTTATAAGATTGATAATATTGAAAGACATGGTCCGGTCCATAATTCTGACTTGCCCCAACTGGCCCAGCTGGATCGGCTTCCTTCTTCATCTTTGTTGGATCACGTCAAGCCTTTAAATCTTGAGATCGAAAGACCTGACCTGGTCCATAGACCTGACTCGTCCCAGCTTAATCGGGTTTCGTCCATATCATTGCTGGAACGAGTCAGGTCATTTAATCTTGGCTTTAGTAAAGTCGAGATGGAAAAGCCTGATTCGATACAGCAACAGCTAACCCGTGCTCCCTCGATCCTCCAGCGGCTTAAGTCTTCCTTGTCGTTTGAGCCTGAATCCGAAGTTACCGGTGGTGGAGAGTTGGCGGAGGAAACTGAAGAAGAAGGGGTGGATGCAAAGGCTGATGATTTCATCAACAGGTTTAGGCAGCAACTGAGGTTGCAAAGGCTTGACTCTATTATACGTTACAGGGATATGCTCAAACGATACTAA 834 0.4484 MTETSEASVYGVMASWLTPSNLFIFINLVIGTIAISSRFANTTKRQHQLVRSPSLLERLASFNLCYHKHEPTTRMMTTTTTMFHRVVDPVERLDEFRLDQVPSSSLLDRVRSFNLGFYKIDNIERHGPVHNSDLPQLAQLDRLPSSSLLDHVKPLNLEIERPDLVHRPDSSQLNRVSSISLLERVRSFNLGFSKVEMEKPDSIQQQLTRAPSILQRLKSSLSFEPESEVTGGGELAEETEEEGVDAKADDFINRFRQQLRLQRLDSIIRYRDMLKRY 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00575 277 Pfam Domain of unknown function (DUF4408) 8 39 IPR025520 -
Gma09g00575 277 PANTHER COTTON FIBER (DUF761) 238 276 - -
Gma09g00575 277 PANTHER COTTON FIBER (DUF761) 7 69 - -
Gma09g00575 277 MobiDBLite consensus disorder prediction 222 244 - -
Gma09g00575 277 Pfam Cotton fibre expressed protein 242 276 IPR008480 -
Gma09g00575 277 PANTHER DUF4408 DOMAIN PROTEIN 7 69 - -
Gma09g00575 277 PANTHER DUF4408 DOMAIN PROTEIN 238 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00575 Gma-Chr9 6208104 6209489 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00575 - - gmx:100781094 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00575 09 6208104 6209489 Gma09g00575 09 6208104 6209489 ECH
Gma15g01587 15 15490816 15492236 Gma09g00575 09 6208104 6209489 GST
Gma13g00844 13 22714530 22715693 Gma09g00575 09 6208104 6209489 PCT
Gma09g00575 09 6208104 6209489 Gma13g00844 13 22714530 22715693 PCT