Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00844 ATGATGGCAGACCCAGCAAGTTTCATAGCAAGCTGGTTAACTCCTTCTTACCTCTTCATCTTGGTCAACCTCGTCATAGGCACCATAGCCATCACTTCTCGCTTCAGTTCCACGCCCAAAAACCAACAAGCCCACCACCCCCAACCACTCAGCTCCTTCAATACCCATCATCACCAACCCAACTGCACTCAGCCCCAACTCCTTCCAATACCCTCACTGTTGCAGCGAGTCACGTCCTTCAACCTCTCCCTCCACAAACACCAACCCACACCTCCAGAAACACAACATCTGCATCCCGAACCCCAACCCCAACCTGAAAAGCCGCCGGAACTGCTTCGGACTCCCTCACTCTTGGAGCGACTCAGGTCCTTCCATAATCTTTCTCTCCACAAACATGTCCAACCCGAGCCAGAGCCAGAGCCAGAACCTGAACCTGAAAAGCCGGAACTGGTTCGGAGTCCCTCGCTCTTGCAGCGGATTCAGTCCATAAACTTCTCCCATCTCTACAGATCCGACTTCAGTCACCGAGATGATGAGGATCCCGATTCGGGTTCGGATCCGGGTCGCGGTTCGGGAAAGGCGGCGGAGATGAGGAAATCGGCGAGCGTGAGAGGGGGTTTGACGGATAGCGAGTGGGAGGAGGTCGAGAAGCGGAGGCCGCAGACGGCGAGGCCGGTTGAAACGACGACGTCGTGGAGAGAAGACGAAGAAGTAGACGCCAAAGCTGACGATTTCATCAACAGGTTCAAGAAACAGTTGAGGTTGCAGAGGATTGATTCCCTTCTCCGTTACAGAGGAGGTAACTCATCATGA 813 0.5412 MMADPASFIASWLTPSYLFILVNLVIGTIAITSRFSSTPKNQQAHHPQPLSSFNTHHHQPNCTQPQLLPIPSLLQRVTSFNLSLHKHQPTPPETQHLHPEPQPQPEKPPELLRTPSLLERLRSFHNLSLHKHVQPEPEPEPEPEPEKPELVRSPSLLQRIQSINFSHLYRSDFSHRDDEDPDSGSDPGRGSGKAAEMRKSASVRGGLTDSEWEEVEKRRPQTARPVETTTSWREDEEVDAKADDFINRFKKQLRLQRIDSLLRYRGGNSS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00844 270 Pfam Cotton fibre expressed protein 235 265 IPR008480 -
Gma13g00844 270 MobiDBLite consensus disorder prediction 168 238 - -
Gma13g00844 270 MobiDBLite consensus disorder prediction 131 151 - -
Gma13g00844 270 PANTHER COTTON FIBER (DUF761) 2 89 - -
Gma13g00844 270 PANTHER COTTON FIBER (DUF761) 142 179 - -
Gma13g00844 270 PANTHER COTTON FIBER (DUF761) 178 266 - -
Gma13g00844 270 MobiDBLite consensus disorder prediction 131 149 - -
Gma13g00844 270 MobiDBLite consensus disorder prediction 170 186 - -
Gma13g00844 270 Pfam Domain of unknown function (DUF4408) 7 35 IPR025520 -
Gma13g00844 270 MobiDBLite consensus disorder prediction 94 110 - -
Gma13g00844 270 MobiDBLite consensus disorder prediction 84 111 - -
Gma13g00844 270 PANTHER DUF4408 DOMAIN PROTEIN 178 266 - -
Gma13g00844 270 PANTHER DUF4408 DOMAIN PROTEIN 142 179 - -
Gma13g00844 270 PANTHER DUF4408 DOMAIN PROTEIN 2 89 - -
Gma13g00844 270 MobiDBLite consensus disorder prediction 209 238 - -
Gma13g00844 270 MobiDBLite consensus disorder prediction 39 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00844 Gma-Chr13 22714530 22715693 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00844 - - gmx:102664184 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00844 13 22714530 22715693 Gma13g00844 13 22714530 22715693 ECH
Gma13g00844 13 22714530 22715693 Gma15g01587 15 15490816 15492236 PCT
Gma13g00844 13 22714530 22715693 Gma09g00575 09 6208104 6209489 PCT
Gma15g01587 15 15490816 15492236 Gma13g00844 13 22714530 22715693 PCT
Gma09g00575 09 6208104 6209489 Gma13g00844 13 22714530 22715693 PCT