Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01544 ATGGGAACGTTTCAGAGCTTTAGAAAAGCCTATGGAGCTCTCAAGGACTCTACCAAGGTTGGCCTTGCCAAAGTCAATAGCGAATACAAGGAGTTGGATATTGCAATTGTAAAAGCTACCAATCATGTGGAATATCCTCCCAAGGAACGTCATGTTCGAAAAATATTCTGTGCAACATTAGCACACCAGCCACGGGCAGATGTGGCATACTGCATTCACAAACTTGCTAAGAGACTTTCAAAGACGCGAAGTTGGATAGTTGCTATAAAGACATTGATAGTCATTCATAGGACTTTGAGAGAGGGTGATCCTACCTTTAGAGAAGAGATTCTTAACTACTCACGTAGGGGACATATTCTCCAAATATCCAATTTCAAAGATGATTCAAGCCCTTTAGCTTGGGATTGTTCTGCATGGGTGCGAACTTATGCACTATTTTTAGAAGAAAGACTTGAATGCTTTAGAGTCCTTAAATATGACATAGAATCCGAGCGTTTAACAAAAGCATCACCAGTGGTTAATAATGTACGTAGCAAAACTCGGTCGTTGGATAGTGATGATCTATTGGAGCAGCTACCTGCACTACAACAACTTCTATATCGCCTTATTGGTTGTCAACCTGAAGGATGTGCTTACAGCAATCATCTAGTACAATATGCGTTGGCCCTGGTTTTGAAAGAGAGTTTCAAAATATACTGCACACTCAATGACGGAATCATCAATCTTGTGGACGTGTTCTTTGATATGACAAGACATGACGCAGTGAAAGCTCTAAACATTTATAAAAGAGCTGGCCAACAGGCTGAAAATCTTGCTGACTTCTATGAATACTGCAAAGGCTTGGACCTTACTAGGAATTTCCAATTTCCAACACTGAGACAGCCACCTCCCTCTTTCCTTGCAACAATGGAAGAATACATTAAAGAAGCACCACAGACAGGCTATGTTAATAAGAAAGTGGAGTATCAGGAAAATGAAGAATCATCTAAAGAAGAATCAGAATCCAATGAATCAGCAGAGCCTCAAGCAAATGAAGAACAAGTTGAAGAAGTCAATGAGGAAGAGTCAGTGGAAGAGGAAGAAGAACAACCTAAGGAGGAGGAGGTAGAGCCTCCTCCTTTGATATCAACTGATGATGGTACAAATGATTTGCTGGGTCTTAATGAAATAAATCCAAAAGCTATGGAACTGGAGGAAAGCAATGCCATGGCTCTTGCAATTGTACCACCTGGTGGAAATAATCCAAACAATCTTGCTTTGAGTAACTTTGATGGGACTACTGGATGGGAACTTTCACTAGTTACAACACCAAGTAACCATTCCAGTCAAGCCCCAGATCGCAGATTGGCTGGTGGTTTTGACAAACTATTACTGGATAGTCTATATGAAGATGAAAATGCCAGGAGACAACTCCAACTCCAAAATGCAGGTTATGGACATAGTGGAACAATGGATATACAGAACAACAACCCATTTGATCATTACAACCAACAGGATCCCTTTGCAATGTCCAACAACATAGCACCTCCCCCTAGTGTGCAAATGGCACTAATGTCTCAACAACAGCAGCAACAACAAATGATGTTCCAACAGCAGCAAATGATGTACCAACAAGCACAACAACAGCACAACAACATGATGATGGTCCCTTACCACCAGCAACAACCATATAACCAATACCCTCAACAGATGTATAATTCAAGTTCTCATAATCCATTTGGAGATCCTTTACCGTCTCTCAACTCTTGCAACACCATCACTGGTGTGTCCCCATACTCCACATCTACTCCCACTCTTCTTCGTCCACCAACGGGGTCTCACACCACCGATGCGTCAACCCTTTGGATTATTCATTGTGTGATGAAGAGGAGGAAGTCTAGTGATGAGGATAATTCCAGTGGGAGTGGTGGTGATGAGGATTAA 1923 0.4165 MGTFQSFRKAYGALKDSTKVGLAKVNSEYKELDIAIVKATNHVEYPPKERHVRKIFCATLAHQPRADVAYCIHKLAKRLSKTRSWIVAIKTLIVIHRTLREGDPTFREEILNYSRRGHILQISNFKDDSSPLAWDCSAWVRTYALFLEERLECFRVLKYDIESERLTKASPVVNNVRSKTRSLDSDDLLEQLPALQQLLYRLIGCQPEGCAYSNHLVQYALALVLKESFKIYCTLNDGIINLVDVFFDMTRHDAVKALNIYKRAGQQAENLADFYEYCKGLDLTRNFQFPTLRQPPPSFLATMEEYIKEAPQTGYVNKKVEYQENEESSKEESESNESAEPQANEEQVEEVNEEESVEEEEEQPKEEEVEPPPLISTDDGTNDLLGLNEINPKAMELEESNAMALAIVPPGGNNPNNLALSNFDGTTGWELSLVTTPSNHSSQAPDRRLAGGFDKLLLDSLYEDENARRQLQLQNAGYGHSGTMDIQNNNPFDHYNQQDPFAMSNNIAPPPSVQMALMSQQQQQQQMMFQQQQMMYQQAQQQHNNMMMVPYHQQQPYNQYPQQMYNSSSHNPFGDPLPSLNSCNTITGVSPYSTSTPTLLRPPTGSHTTDASTLWIIHCVMKRRKSSDEDNSSGSGGDED 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01544 640 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 583 - -
Gma15g01544 640 Coils Coil 343 363 - -
Gma15g01544 640 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Gma15g01544 640 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Gma15g01544 640 Gene3D ANTH domain 173 326 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Gma15g01544 640 Gene3D - 5 161 IPR008942 -
Gma15g01544 640 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Gma15g01544 640 MobiDBLite consensus disorder prediction 343 367 - -
Gma15g01544 640 MobiDBLite consensus disorder prediction 322 385 - -
Gma15g01544 640 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 583 IPR045192 GO:0048268|GO:0072583
Gma15g01544 640 SUPERFAMILY GAT-like domain 178 309 - -
Gma15g01544 640 CDD ANTH_N 32 154 - -
Gma15g01544 640 SMART enth_2 30 161 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01544 Gma-Chr15 14597591 14607725 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01544 K20044 - gmx:100786060 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01544 15 14597591 14607725 Gma15g01544 15 14597591 14607725 ECH
Gma15g01544 15 14597591 14607725 Gma09g00539 09 5634346 5640188 GST
Gma17g00560 17 4606921 4611862 Gma15g01544 15 14597591 14607725 PCT
Gma13g00806 13 22361165 22366373 Gma15g01544 15 14597591 14607725 PCT
Gma15g01544 15 14597591 14607725 Gma17g00560 17 4606921 4611862 PCT
Gma15g01544 15 14597591 14607725 Gma13g00806 13 22361165 22366373 PCT