Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00884 ATGTCTCTCCCCACCAAACGGTCGGGCACCGCTGGTTCCTCCCCGTCGCCGCCACCCCCTATGAAAAAGGCCAAGTCCCTCCTCCTCCACTCCTCCTCCTCCTCCGACGCCGTTCTGGACCCTTCCTCCATGCCTCTCGACGACGATCTCCCCAATGCCCGCGCCGCCAATCTCGCCCGCAAGAAAGCCACCCCGCCCCAACCCGCCAAGAAGCTCCTCATCAAGCTCCACAAAGCTAAACCAACATTGCCCACAAATTTTGAGGAGGATACATGGGCAAAACTAAAGTCTGCCATTCGTGCTATATTTTTGAAGCAACCTAACTCTTGTGATTTGGAGAAGCTTTATCAGGCTGTGAATGATCTCTGCCTTTATAAAATGGGTGGAAATCTTTATCAACGAATTGAAAAGGAGTGTGAAGCACATATATCTGCAGCACTGCAGTCTTTGGTTGGCCAAAGCCCGGATTTGGTTGTTTTTCTGTCTCTAGTTGAGAGATGTTGGCAGGATCTTTGTGACCAAATGTTGATGATCCGTGGTATAGCCTTGTTTCTGGATAGGACATATGTGAAGCAAACTGCAAATGTCCGGTCATTATGGGACATGGGCTTACAACTTTTCCGCAAACATCTTTCATTGTCTCCGGAAGTAGAACACAAAACTGTTACAGGTCTTCTACGAATGATTGAAAGTGAAAGAAAAGGTGAAGCAGTGGATAGAACTCTTCTAAACCATCTTTTGAAGATGTTTACTGCTCTGGGAATTTATGCAGAAAGCTTTGAGAAGCCATTCCTTGAATGCACATCTGAATTTTATGCTGCTGAAGGCGTGAAATACATGCAGCAATCAGATGTTCCAGATTACTTGAAGCATGTGGAGATAAGATTGCAAGAAGAACATGAAAGATGTTTGATCTACTTGGATGCAAGTACTAGGAAGCCATTGATAGCAACGGCAGAAAAGCAACTTCTTGAACGTCATATACCTGCCATTCTTGATAAGGGCTTCGCAATGCTTATGGATGGGAATCGTATTGAAGACCTCCAGAGAATGTACTTACTCTTTTCAAGGGTCAATGCCCTCGAGTCACTGAGGCTGGCCATTAGTTCATACATCAGGAGAACTGGTCAGGGCATTGTTTTGGATGAGGAGAAAGATAAAGATATGGTTTCATCCCTCTTGGAATTTAAGGCTTCTCTTGACACAACATGGGAAGAAAGCTTTTCCAAGAATGAAGCATTCTGTAACACCATTAAAGATTCATTTGAGCATCTCATCAATCTTCGTCAGAACCGGCCTGCAGAGTTGATTGCCAAGTTTTTGGATGAGAAACTTCGTGCAGGTAACAAAGGCACTTCAGAAGAAGAGTTGGAGGGTACACTTGATAAAGTCCTGGTTTTATTCAGGTTCATTCAGGGCAAGGATGTGTTTGAGGCATTTTATAAGAAAGATCTTGCAAAAAGACTACTGTTAGGAAAGAGTGCTTCTATTGATGCAGAGAAATCTATGATCTCCAAGTTGAAGACCGAGTGCGGCAGCCAGTTCACAAACAAACTAGAAGGGATGTTTAAGGACATTGAATTATCAAAAGAAATAAACGAGTCCTTCAAGCAGTCATCCCAGGCTAGGACAAAACTCCCATCAGGGATTGAAATGAGTGTTCATGTCTTGACAACTGGGTACTGGCCGACATATCCACCCATGGATGTTAGACTTCCTCATGAATTGAATGTTTACCAGGATATTTTCAAAGAGTTCTATCTAAGCAAATATAGTGGGAGGCGTCTGATGTGGCAAAATTCATTAGGTCACTGTGTCCTAAAGGCAGAGTTTCCTAAAGGGAAAAAGGAGTTGGCTGTCTCCCTATTTCAGACTGTTGTTCTTATGTTATTCAATGATGCTGAGAAACTAAGCTTTCAAGATATCAAGGACTCTACTGGTATAGAGGGCAAGGAATTGAGAAGGACTCTGCAATCACTTGCATGTGGAAAAGTTCGTGTCCTACAAAAGTTGCCAAAGGGTAGAGATGTGGAGGATGATGACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTTTATCGTATAAAGGTGAATGCAATTCAGTTGAAGGAGACAGTGGAGGAGAACACAAGCACCACAGAAAGAGTTTTCCAAGACCGTCAGTATCAGGTTGATGCTGCTATTGTGAGGATAATGAAGACTAGGAAAGTGCTTAGTCACACGCTTCTTATTACTGAACTCTTCCAACAGCTCAAATTTCCAATAAAACCAGCTGACTTGAAGAAAAGGATCGAAAGCCTGATTGACAGGGAGTATCTGGAGAGAGACAAGAACAACCCTCAAATATACAATTACCTGGCATAG 2367 0.4326 MSLPTKRSGTAGSSPSPPPPMKKAKSLLLHSSSSSDAVLDPSSMPLDDDLPNARAANLARKKATPPQPAKKLLIKLHKAKPTLPTNFEEDTWAKLKSAIRAIFLKQPNSCDLEKLYQAVNDLCLYKMGGNLYQRIEKECEAHISAALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALFLDRTYVKQTANVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIESERKGEAVDRTLLNHLLKMFTALGIYAESFEKPFLECTSEFYAAEGVKYMQQSDVPDYLKHVEIRLQEEHERCLIYLDASTRKPLIATAEKQLLERHIPAILDKGFAMLMDGNRIEDLQRMYLLFSRVNALESLRLAISSYIRRTGQGIVLDEEKDKDMVSSLLEFKASLDTTWEESFSKNEAFCNTIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTGIEGKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQLKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00884 788 Gene3D Cullin Repeats 329 430 - -
Gma15g00884 788 PANTHER CULLIN 50 788 IPR045093 -
Gma15g00884 788 Gene3D Cullin; Chain C, Domain 2 547 702 - -
Gma15g00884 788 Gene3D - 715 788 IPR036388 -
Gma15g00884 788 SMART cul_2 462 611 IPR016158 -
Gma15g00884 788 MobiDBLite consensus disorder prediction 1 50 - -
Gma15g00884 788 SUPERFAMILY Cullin homology domain 429 699 IPR036317 -
Gma15g00884 788 ProSiteProfiles Cullin family profile. 432 661 IPR016158 -
Gma15g00884 788 PANTHER CULLIN-4A 50 788 - -
Gma15g00884 788 ProSitePatterns Cullin family signature. 761 788 IPR016157 GO:0006511|GO:0031461|GO:0031625
Gma15g00884 788 Gene3D Cullin Repeats 431 542 - -
Gma15g00884 788 Pfam Cullin family 92 689 IPR001373 GO:0006511|GO:0031625
Gma15g00884 788 SUPERFAMILY Cullin repeat-like 86 428 IPR016159 -
Gma15g00884 788 SUPERFAMILY "Winged helix" DNA-binding domain 700 788 IPR036390 -
Gma15g00884 788 Pfam Cullin protein neddylation domain 720 780 IPR019559 -
Gma15g00884 788 Gene3D Cullin Repeats 214 327 - -
Gma15g00884 788 Gene3D Cullin Repeats 79 210 - -
Gma15g00884 788 SMART Cullin_Nedd8_2 717 782 IPR019559 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00884 Gma-Chr15 7321816 7334226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00884 K10609 - gmx:100805491 1472.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00884 15 7321816 7334226 Gma15g00884 15 7321816 7334226 ECH
Gma15g00884 15 7321816 7334226 Gma13g01927 13 34579465 34593629 GST
Gma15g00884 15 7321816 7334226 Gma17g00230 17 1872013 1878871 PCT