Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01927 ATGTCTCTCCCCACCAAACGGTCGAGCACCGCTGGTTCCTCCCTGTCGCCGCCACCTCCTATGAAAAAGGCCAAGTCCCTCCTCCTCCGCTCCTCCTCCGACGACCACGACGCCGTTTTGGACCCTTCCTCCATGCCTCTCGACGACGATCTCCCCAATGCCCGCGCCGCCAATCTCGCCCGCAAGAAAGCCACCCCGCCCCAACCCGCCAAGAAGCTCCTCATCAAGCTCCACAAAGCTAAACCAACATTGCCCACAAATTTCGAGGAGGATACATGGGCAAAACTAAAGTCTGCCATTTGTGCTATATTTTTGAAGCAACCTAACTCTTGTGACTTGGAGAAGCTTTATCAGGCTGTGAACGATCTCTGCCTTTATAAAATGGGTGGAAATCTTTATCAACGGATTGAAAAGGAGTGTGAAGCACATATATCTGCTGCACTGCAGTCTTTGGTTGGCCAAAGCCCAGATTTGGTTGTTTTTCTGTCTCTAGTTGAGAGATGTTGGCAGGATCTTTGTGACCAAATGTTGATGATTCGTGGTATAGCCTTGTATCTAGATAGGACATATGTGAAGCAAACAGCAAATGTCCGATCATTATGGGACATGGGCTTACAACTTTTCCGCAAACATCTTTCATTGTCTCCTGAAGTAGAACACAAAACTGTTACAGGTCTTCTACGAATGATTGAAAGTGAAAGAAAAGGTGAAGCAGTGGATAGAACTCTTCTAAACCACCTTTTGAAGATGTTTACTGCTCTGGGAATTTATGCAGAAAGCTTTGAGAAGCCATTCCTTGAATGCACATCTGAATTTTATGCTGCTGAAGGTGTGAAATACATGCAGCAATCAGATGTTCCAGATTACTTGAAGCATGTGGAGATACGATTGCAAGAAGAACATGAAAGATGTTTGATCTACTTGGATGCAAGTACTAGGAAGCCATTGATAGCAACAGCAGAAAAACAACTTCTTGAACGTCATATACCTGCCATTCTTGATAAGGGCTTTGCAATGCTTATGGATGGGAATCGTATTGAAGACCTTCAGAGAATGTACTCACTCTTTTCAAGGGTCAATGCCCTCGAGTCATTGAGGCAGGCCATTAGTTCATATATCAGGAGAACTGGTCAGGGCATTGTTTTGGACGAGGAGAAAGATAAGGATATGGTTTCATCCCTTTTGGAATTTAAGGCTTCTCTTGACACAACATGGGAAGAAAGCTTTTCCAAGAATGAAGCATTCTGTAACACCATCAAAGATTCGTTTGAGCATCTCATCAATCTTCGTCAGAACCGACCTGCTGAATTGATTGCCAAGTTTTTGGATGAGAAACTTCGTGCAGGTAACAAGGGCACTTCAGAAGAAGAGTTGGAGGGTACACTTGATAAAGTCCTTGTTTTATTCAGGTTCATTCAGGGCAAGGATGTGTTTGAGGCATTTTATAAGAAAGATCTTGCAAAAAGACTGTTGTTGGGAAAGAGTGCTTCTATTGATGCAGAGAAATCTATGATCTCCAAGTTGAAGACCGAGTGTGGCAGCCAGTTCACAAACAAACTAGAAGGGATGTTTAAGGACATTGAATTATCAAAAGAAATAAACGAGTCCTTCAAACAGTCATCCCAGGCTAGGACAAAACTCCCATCCGGGATTGAAATGAGTGTTCATGTTTTGACAACTGGGTACTGGCCGACGTATCCACCCATGGATGTTAGACTTCCTCATGAATTGAATGTTTACCAGGATATTTTCAAAGAGTTCTATCTAAGTAAATATAGTGGAAGGCGTCTGATGTGGCAAAATTCATTAGGTCACTGTGTCTTAAAGGCAGAGTTTCCTAAAGGGAAAAAAGAGTTGGCTGTCTCCCTATTTCAGACTGTTGTTCTGATGTTATTCAATGATGCTGAGAAACTAAGCTTTCAAGATATCAAGGACTCTACTGGTATAGAGGACAAGGAACTGAGAAGGACTCTGCAATCACTTGCATGTGGAAAAGTTCGTGTCCTACAAAAGTTGCCAAAGGGTAGAGATGTGGAGGATGATGACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTTTATCGTATAAAGGTGAATGCAATTCAGTTGAAGGAGACAGTAGAGGAGAACACAAGCACCACTGAAAGAGTTTTCCAAGACCGTCAATATCAGGTTGATGCTGCTATTGTGAGGATAATGAAGACTAGGAAAGTGCTTAGTCACACGCTTCTTATTACTGAACTCTTCCAACAGCTCAAATTTCCAATAAAACCAGCTGACTTGAAGAAAAGGATCGAAAGCCTGATTGATAGGGAGTATCTGGAGAGAGACAAGAACAACCCTCAAATATACAATTACCTTGCATAA 2370 0.4262 MSLPTKRSSTAGSSLSPPPPMKKAKSLLLRSSSDDHDAVLDPSSMPLDDDLPNARAANLARKKATPPQPAKKLLIKLHKAKPTLPTNFEEDTWAKLKSAICAIFLKQPNSCDLEKLYQAVNDLCLYKMGGNLYQRIEKECEAHISAALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTANVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIESERKGEAVDRTLLNHLLKMFTALGIYAESFEKPFLECTSEFYAAEGVKYMQQSDVPDYLKHVEIRLQEEHERCLIYLDASTRKPLIATAEKQLLERHIPAILDKGFAMLMDGNRIEDLQRMYSLFSRVNALESLRQAISSYIRRTGQGIVLDEEKDKDMVSSLLEFKASLDTTWEESFSKNEAFCNTIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQLKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01927 789 Gene3D Cullin Repeats 330 431 - -
Gma13g01927 789 ProSiteProfiles Cullin family profile. 433 662 IPR016158 -
Gma13g01927 789 Pfam Cullin protein neddylation domain 721 781 IPR019559 -
Gma13g01927 789 SUPERFAMILY "Winged helix" DNA-binding domain 701 789 IPR036390 -
Gma13g01927 789 MobiDBLite consensus disorder prediction 1 16 - -
Gma13g01927 789 SUPERFAMILY Cullin homology domain 430 700 IPR036317 -
Gma13g01927 789 ProSitePatterns Cullin family signature. 762 789 IPR016157 GO:0006511|GO:0031461|GO:0031625
Gma13g01927 789 Gene3D Cullin Repeats 215 328 - -
Gma13g01927 789 PANTHER CULLIN 51 789 IPR045093 -
Gma13g01927 789 SMART Cullin_Nedd8_2 718 783 IPR019559 -
Gma13g01927 789 MobiDBLite consensus disorder prediction 28 43 - -
Gma13g01927 789 MobiDBLite consensus disorder prediction 1 51 - -
Gma13g01927 789 SUPERFAMILY Cullin repeat-like 87 429 IPR016159 -
Gma13g01927 789 Gene3D Cullin Repeats 432 543 - -
Gma13g01927 789 Pfam Cullin family 93 690 IPR001373 GO:0006511|GO:0031625
Gma13g01927 789 Gene3D Cullin Repeats 80 211 - -
Gma13g01927 789 Gene3D - 716 789 IPR036388 -
Gma13g01927 789 PANTHER CULLIN-4A 51 789 - -
Gma13g01927 789 Gene3D Cullin; Chain C, Domain 2 548 703 - -
Gma13g01927 789 SMART cul_2 463 612 IPR016158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01927 Gma-Chr13 34579465 34593629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01927 K10609 - gmx:100805491 1471.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01927 13 34579465 34593629 Gma13g01927 13 34579465 34593629 ECH
Gma15g00884 15 7321816 7334226 Gma13g01927 13 34579465 34593629 GST
Gma13g01927 13 34579465 34593629 Gma17g00230 17 1872013 1878871 PCT