Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00409 ATGTCGAGCTTACTTAATTCTTCTCTGAATGGGTCTGCTTCAAATCTTCCGGATGGTGCTGGGCGTTCTTTTGCTACGTCATTCTCTGGTTCTATTCAGGGATTGCACAACATTCATGGGAACTTTAATGTACCCAATATGCCCAGTACACTCACATCAAGAAACTCAACAATAAATAGTGTTCCAACTGGGGGAGGAGTTCAGCAACCTTCGGCAAGCCTTTCTAGTGGAAGATTTGCATCAAATAATCTACCTGTTGCTCTGTCACAGCTATCTCATGGAAGCTCCCATGGACATTCAGGAGTCAACAGCAGAGGAGGTATAAGTGTTGTAGGAAATCCTGGATTTAATAGTAGCACAAATGGAGTTGCTGGTCCTATTCCTGGGATTCTTCCAACTTCTGCTGCAATTGGTAACCGAAATGCTGTTCCAGGATTGGGAGTATCCCCAATTTTGGGAAATGCAGGTCCCCGAATCACTAGTTCGATGGGAAACATGGTCGGTGGAGGGAACATTGGGAGGATAAGCTCTGGAGGATTGTCTGTTCCAGGTCTTGCTTCTCGTCTAAATGTAAGTGGAAACACTGGATCTGGTGGTTTAGGTGTGCAAGGACAAAATAGATTGATGAGTGGTGTGCTTCCACAAGGATCTCCACAGGTAATTTCAATGCTAGGAAATTCCTATCCTAGTGCTGGAGGTCCGCTTTCACAAAGTCATGTTCAAACAGTAAATAACTTGAACTCTATGGGGATGCTGAATGATGTGAATTCCGGTGACAGTACACCTTTTGACATCAATGACTTTCCTCAACTGACCAGTCGTCCTAGTTCTGCTGGTGGGCCTCAAGGACAGTTGGGTTCTTTACGAAAACAGGGTCTTCCCATTGTCCAACAAAACCAAGAGTTTAGTATTCAAAATGAAGACTTCCCAGCTTTACCAGGATTCAAAGGTGGTAATTCAGATTTTGCTATGGATATGTACCAGAAAGAACAACTTCATGATAATACTGTGTCAATGATGCAATCTCAACATTTCTCCATGGGGAGGTCTGCTGGTTTCAGTTTGGGAGGATCATATCCATCACATCGTACACAACAGCAACAGCAGCATGCCCCTTCTGTCAGTAGCAATGGTGTCTCATTTTCATCTGTAAACAATCAAGATCTTCTCCATCTGCATGGAACGGATATTTTTCCATCTTCACACTCAACATATCATTCCCAGACCAGTGGGCCTCCTGGCATTGGACTAAGGCCTCTGACTTCTCCAAATACGGTTTCTGGTATGGGTTCATATGACCAGCTTATCCAGCAGTATCAACAGCACCAGAACCAGTCCCAGTTCCGCCTTCAGCAGATGTCAGCTGCAAATCAGTCTTTTAGGGATCAGGGCATGAAGTCTATGCAAACTGCTCAATCTAGTCCAGATCCATTTGGTGCACTTGGCTTGTTCAGTGTAGTCCATATAAGTGATCCTAACCTGAAATATCTTGCTCATGGGATTGATCTTACAACACTTGGGTTGAATTTGAATTCATCAGAAAACCTTTACAAGACTTTTCGGTCCCCGTGGTCTGATGAACCAGCCAAGGGTGATCCAGAGTTCAGTGTGTTACAATGTTATTATGTTAAACAGCCTCCTGCTCTTCACCAAGGTTATTTTTCAAAGTTTTCGGTGGAAACTTTGTTTTACATATTTTACAGCATGCCCAAAGATGAAGCACAACTATACGCGGCAAATGAACTTTACAAACGTGGTTGGTTTTATCATAAAGAGCATCGTTTATGGTTTATAAGAGTTCCCAACATGGAGCCGCTTGTCAAAACAAACACATACGAGAGAGGATCTTACCACTGTTTTGATCCAAACACATTTGAAACAGTCCGGAAGGATAATTTTGTTCTTCATTATGAAATGGTGGAAAAGAGACCGTCTGTGCCTCAACATTGA 1950 0.4308 MSSLLNSSLNGSASNLPDGAGRSFATSFSGSIQGLHNIHGNFNVPNMPSTLTSRNSTINSVPTGGGVQQPSASLSSGRFASNNLPVALSQLSHGSSHGHSGVNSRGGISVVGNPGFNSSTNGVAGPIPGILPTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVGGGNIGRISSGGLSVPGLASRLNVSGNTGSGGLGVQGQNRLMSGVLPQGSPQVISMLGNSYPSAGGPLSQSHVQTVNNLNSMGMLNDVNSGDSTPFDINDFPQLTSRPSSAGGPQGQLGSLRKQGLPIVQQNQEFSIQNEDFPALPGFKGGNSDFAMDMYQKEQLHDNTVSMMQSQHFSMGRSAGFSLGGSYPSHRTQQQQQHAPSVSSNGVSFSSVNNQDLLHLHGTDIFPSSHSTYHSQTSGPPGIGLRPLTSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQQMSAANQSFRDQGMKSMQTAQSSPDPFGALGLFSVVHISDPNLKYLAHGIDLTTLGLNLNSSENLYKTFRSPWSDEPAKGDPEFSVLQCYYVKQPPALHQGYFSKFSVETLFYIFYSMPKDEAQLYAANELYKRGWFYHKEHRLWFIRVPNMEPLVKTNTYERGSYHCFDPNTFETVRKDNFVLHYEMVEKRPSVPQH 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00409 649 MobiDBLite consensus disorder prediction 46 78 - -
Gma15g00409 649 Gene3D - 468 649 IPR038635 -
Gma15g00409 649 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 2 649 - -
Gma15g00409 649 MobiDBLite consensus disorder prediction 253 284 - -
Gma15g00409 649 MobiDBLite consensus disorder prediction 349 380 - -
Gma15g00409 649 Pfam NOT2 / NOT3 / NOT5 family 518 639 IPR007282 GO:0006355
Gma15g00409 649 MobiDBLite consensus disorder prediction 253 287 - -
Gma15g00409 649 PANTHER CCR4 NOT-RELATED 2 649 IPR040168 GO:0030015
Gma15g00409 649 MobiDBLite consensus disorder prediction 401 429 - -
Gma15g00409 649 MobiDBLite consensus disorder prediction 357 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00409 Gma-Chr15 3428764 3435726 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00409 K12605 - gmx:100806559 1258.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00409 15 3428764 3435726 Gma15g00409 15 3428764 3435726 ECH
Gma15g00409 15 3428764 3435726 Gma12g00663 12 5721084 5729139 PCT
Gma15g00409 15 3428764 3435726 Gma11g01316 11 11287545 11295540 PCT
Gma12g00663 12 5721084 5729139 Gma15g00409 15 3428764 3435726 PCT
Gma11g01316 11 11287545 11295540 Gma15g00409 15 3428764 3435726 PCT