Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00663 ATGTCGGGGTTACTTAATTCTTCTCTGAATGGATCTGCTTCAAATCTTCCAGATGGTGCTGGACGGTCTTTTGCTTCATCGTTTTCTGGTCAGTCTGGTGCAGCCTCCCCAAATTTTCATCACACTGGAGCTATTCAAGGATTGCACAATATTCATGGGAGCTTTAATGTTCCCAACATGCCCGGTACACTCACATCAAGAAACTCAACTATAAATAATGTACCATCGGGGGGTGTTCAACAACCCACTGGAAGCCTTTCTAGTGGAAGATTTACATCCAACAATCTCCCAGTTGCATTGTCTCAGCTATCTCATGGAAGCTCCCATTCAGGAATCACCAATAGAGGAGGATTGGGAGTAAACCCAATTTTGGGAAATGCAGGTCCTCGAATCACAAGTTCTGTGGGAAACATGGTTGGAGGAGGGAATATTGGAAGGACTGGTGGAGGATTGTCTGTGCCTGCTCTCGCATCTCGTCTAAATTTGGGTGCAAACAGTGGATCCGGTGGTTTAGGTATGCAAGGACCGAATCGATTGATGAGTGGTGTGCTTCCACAAGGATCTCCACAGGTAATTTCAATGCTAGGAAATTCTTATCCTAGTGGGGGTCCACTTTCCCAAAGCCATGTTCAAGCAGTGAGTAACTTGAACTCAATGGGGATGTTGAATGATGTGAATACCAATGACAGTTCACCTTTTGACATCAATGACTTCCCTCAACTGACAAGTCGTCCGAGTTCTGCTGGAGGGCCTCAAGGACAGTTGGGTTCTTTACGAAAACAGGGTCTTGGTGTTAGTCCCATTGTTCAACAAAACCAAGAGTTTAGCATTCAAAATGAAGATTTCCCAGCTTTACCAGGATTCAAAGGTGGTAATGCAGATTATGCTATGGATATGCACCAGAAAGAACAACTTCATGACAATGCTGTGCCAATGATGCAATCTCAGCATTTCTCTATGGGAAGGTCAGCTGGTTTCAGCTTAGGGGGTACATATTCATCACATCGAGCACAACAGCAACAGCATGCTCCTTCAGTCAGTAGTGGCAATGTCTCTTTTTCATCTGTTAACAACCAGGATCTTCTCCATCTACATGGATCAGATATTTTCCCATCTTCACATTCGACCTATCATTCACAGACCAGTGGACCTCCTGGCATTGGATTAAGGCCGCTAAATTCTCCAAATACAGTTTCTGGTATGGGTTCGTATGACCAGCTCATCCAGCAATATCAACAGCACCAAAATCAGTCCCAGTTCCGCCTTCAAATGTCAGCTGTAAATCAGTCTTTTAGGGATCAGGGCATGAAGTCTATTCAAACTGCACAACCGGCACCAGATCCATTTGGTTTGCTCGGCCTGTTAAGTGTGATCCGGATGAGTGATCCTGACCTGACGTCTCTTGCTCTTGGAATTGATCTTACTACTCTGGGGTTAAATTTGAATTCATCAGAAAATCTTCACAAGACCTTTGGGTCTCCATGGTCTGATGAATCAGCTAAGGGCGATCCAGAGTTTACTGTGCCACAATGTTATTATGCCAAACAGCCACCTGCTCTACATCAAGGTTATTTTTCAAAGTTTTCGGTGGAAACATTGTTTTACTTATTTTACAGCATGCCCAAAGATGAAGCACAATTTTACGCCGCCAGTGAGCTTTACAACAGAGGTTGGTTTTATCACAAAGAACATCGTTTGTGGTTTATAAGAGTTCCCAACATGGAGCCGCTGGTTAAAACAAACACATACGAGAGAGGATCTTATCACTGTTTCGATCCAAGCATATTTGAAACCGTCCGAAAGGATAATTTTGTTCTTCATTATGAAATGTTGGAAAAGAGACCACATCTGCCTCAACTTTGA 1863 0.4359 MSGLLNSSLNGSASNLPDGAGRSFASSFSGQSGAASPNFHHTGAIQGLHNIHGSFNVPNMPGTLTSRNSTINNVPSGGVQQPTGSLSSGRFTSNNLPVALSQLSHGSSHSGITNRGGLGVNPILGNAGPRITSSVGNMVGGGNIGRTGGGLSVPALASRLNLGANSGSGGLGMQGPNRLMSGVLPQGSPQVISMLGNSYPSGGPLSQSHVQAVSNLNSMGMLNDVNTNDSSPFDINDFPQLTSRPSSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNAVPMMQSQHFSMGRSAGFSLGGTYSSHRAQQQQHAPSVSSGNVSFSSVNNQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQMSAVNQSFRDQGMKSIQTAQPAPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDESAKGDPEFTVPQCYYAKQPPALHQGYFSKFSVETLFYLFYSMPKDEAQFYAASELYNRGWFYHKEHRLWFIRVPNMEPLVKTNTYERGSYHCFDPSIFETVRKDNFVLHYEMLEKRPHLPQL 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00663 620 PANTHER CCR4 NOT-RELATED 2 120 IPR040168 GO:0030015
Gma12g00663 620 PANTHER CCR4 NOT-RELATED 118 619 IPR040168 GO:0030015
Gma12g00663 620 MobiDBLite consensus disorder prediction 221 259 - -
Gma12g00663 620 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 118 619 - -
Gma12g00663 620 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 2 120 - -
Gma12g00663 620 MobiDBLite consensus disorder prediction 221 254 - -
Gma12g00663 620 Pfam NOT2 / NOT3 / NOT5 family 489 611 IPR007282 GO:0006355
Gma12g00663 620 MobiDBLite consensus disorder prediction 59 87 - -
Gma12g00663 620 MobiDBLite consensus disorder prediction 329 352 - -
Gma12g00663 620 MobiDBLite consensus disorder prediction 373 401 - -
Gma12g00663 620 Gene3D - 440 620 IPR038635 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00663 Gma-Chr12 5721084 5729139 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00663 K12605 - gmx:100807026 1161.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00663 12 5721084 5729139 Gma12g00663 12 5721084 5729139 ECH
Gma12g00663 12 5721084 5729139 Gma11g01316 11 11287545 11295540 GST
Gma15g00409 15 3428764 3435726 Gma12g00663 12 5721084 5729139 PCT
Gma12g00663 12 5721084 5729139 Gma15g00409 15 3428764 3435726 PCT