Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01316 ATGTCGGGGTTACTTAATTCTTCTCTGAATGGATCTGCTTCAAATCTTCCAGATGGTGCTGGACGGTCTTTTGCTTCATCATTTTCTGGTCAGTCTGGTGCAGCCTCCCCAATTTTTCATCACACTGGAGGTATTCAAGGATTGCACAATATTCATGGGAGCTTTAATGTTCCCAACATGCCCGGTACACTCACATCAAGAAACTCAACTATAAATAATGTACCATCGGGGGGTGTTCAACAACCCACTGGAAGCCTTTCTAGTGGAAGATTTACATCCAACAATCTCCCAGTTGCATTGTCTCAGCTATCTCATGGAAGTTCCCTTGGACATTCAGGAGTCACCAATAGAGGAGGTATAAGTGTTGTAGGAAACCCTGGATTTAGTAGTAGCACAAATGGAGTTGGTGGTTCTATTCCTGGGATTCTTCCTACATCTGCTGCAGTTGGTAACCGAAATGCTGTTCCAGGATTGGGAGTAAACCCAATTTTGGGAAATGCAGGTCCTCGAATCACAAGTTCTGTGGGAAACATGGTTGGAGGAGGGAATATTGGAAGGACTGGTGGAGGATTGTCTGTGCCTGGTCTCTCGTCTCGTCTAAATTTGGGTGCAAACAGTGGATCCGGTGGTTTAGGTATGCAAGGACAGAATCGATTGATGAGTGGTGTGCTTCCACAAGGGTCTCCGCAGGTAATTTCAATGCTAGGAAATTCTTATCCTAGTGGGGGTCCACTTTCCCAAAGCCATGTTCAAGCAGTGAGTAACTTGAACTCTATGGGTATGTTGAATGATATGAATTCTAATGACAGTTCCCCTTTTGACATCAATGACTTCCCTCAACTGACAACTCGTCCTAGTTCTGCTGGAGGGCCTCAAGGACAGTTGGGTTCTTTACGAAAACAGGGTCTTGGTGTTAGTCCCATTGTTCAACAAAACCAAGAGTTTAGCATTCAAAATGAAGATTTCCCAGCTTTACCAGGATTCAAAGGTGGTAATGCAGATTATGCTATGGATATGCACCAGAAAGAACAACTTCATGACAATACTGTGCCAATGATGCAATCTCAGCATTTCTCTATGGGAAGGTCAGCTGGTTTCAGCTTAGGGGGTACATATTCATCACATCGAGCACAACAGCAACAGCATGCTCCTTCAGTCAGTAGTGGCAATGTCTCTTTTTCATCTGTTAACAACCAGGATATTCTCCATCTACATGGATCAGATATTTTCCCATCTTCACATTCGACCTATCATTCACAGACCAGTGGACCTCCTGGCATTGGATTAAGGCCGCTAAATTCTCCAAATACAGTTTCTGGTATGGGTTCATATGACCAGCTCATCCAGCAATATCAACAGCACCAAAATCAGTCCCAGTTCCGCCTTCAAATGTCAGCTGTAAATCAGTCTTTTAGGGATCAGGGCATGAAGTCTATTCAAACTGCACAACCAGCACCAGATCCATTTGGTTTGCTTGGCCTGTTAAGTGTGATCAGGATGAGTGATCCTGACCTGACATCTCTTGCTCTTGGAATTGATCTTACTACACTGGGGTTAAATTTGAATTCATCAGAAAATCTTCACAAGACCTTTGGGTCTCCATGGACTGATGAATCAGCTAAGGGAGATCCAGAGTTTACAGTGCCACAATGTTATTTTGCCAAACAGCCACCTGCTCTACATCAAGGTTATTTTTCCAAGTTTTCGGTGGAAACATTGTTTTACATATTTTATAGCATGCCCAAAGATGAAGCCCAATTATATGCCGCCAGTGAGCTTTACAACAGAGGTTGGTTTTATCACAAAGAACATCGTTTATGGTTAATAAGAGTTCCCAACATGGAGCCGCTGGTTAAAACAAACACATATGAGAGAGGATCTTATCACTGTTTCGATCCAAGCATATTTGAAACCGTCCGCAAGGATAATTTTGTTCTACATTATGAAATGTTGGAAAAGAGACCACATCTGCCTCAACTTTGA 1983 0.4302 MSGLLNSSLNGSASNLPDGAGRSFASSFSGQSGAASPIFHHTGGIQGLHNIHGSFNVPNMPGTLTSRNSTINNVPSGGVQQPTGSLSSGRFTSNNLPVALSQLSHGSSLGHSGVTNRGGISVVGNPGFSSSTNGVGGSIPGILPTSAAVGNRNAVPGLGVNPILGNAGPRITSSVGNMVGGGNIGRTGGGLSVPGLSSRLNLGANSGSGGLGMQGQNRLMSGVLPQGSPQVISMLGNSYPSGGPLSQSHVQAVSNLNSMGMLNDMNSNDSSPFDINDFPQLTTRPSSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNTVPMMQSQHFSMGRSAGFSLGGTYSSHRAQQQQHAPSVSSGNVSFSSVNNQDILHLHGSDIFPSSHSTYHSQTSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQMSAVNQSFRDQGMKSIQTAQPAPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWTDESAKGDPEFTVPQCYFAKQPPALHQGYFSKFSVETLFYIFYSMPKDEAQLYAASELYNRGWFYHKEHRLWLIRVPNMEPLVKTNTYERGSYHCFDPSIFETVRKDNFVLHYEMLEKRPHLPQL 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01316 660 PANTHER CCR4 NOT-RELATED 2 659 IPR040168 GO:0030015
Gma11g01316 660 Pfam NOT2 / NOT3 / NOT5 family 529 651 IPR007282 GO:0006355
Gma11g01316 660 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 2 659 - -
Gma11g01316 660 Gene3D - 480 660 IPR038635 -
Gma11g01316 660 MobiDBLite consensus disorder prediction 412 441 - -
Gma11g01316 660 MobiDBLite consensus disorder prediction 369 391 - -
Gma11g01316 660 MobiDBLite consensus disorder prediction 59 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01316 Gma-Chr11 11287545 11295540 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01316 K12605 - gmx:100807026 1215.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01316 11 11287545 11295540 Gma11g01316 11 11287545 11295540 ECH
Gma12g00663 12 5721084 5729139 Gma11g01316 11 11287545 11295540 GST
Gma15g00409 15 3428764 3435726 Gma11g01316 11 11287545 11295540 PCT
Gma11g01316 11 11287545 11295540 Gma15g00409 15 3428764 3435726 PCT