Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00407 ATGGAGTTCCTCAGTTTACTTTATGGTGCTATGGCATTGTACTTCTGTTTCCTGATCTGGAAATTGTTTGATCAGAGAAGGGACCAAGAGTGCTACGTATTGGACTACCAACTTTACAAGCCAAGCGATGAAAGAAAGCTTGGAACTGAACGCTGTGGGAAGATCATAGGGAGGAACAAGCACTTGGGTCTGAATGAGTACAAGTTCCTCCTCAAGGCCATTGTCAACTCTGGCATTGGTGAGGAAACTTATGCCCCAAGAAACGTCATCGAGGGTCGTGAGGCAAATCCAACATTGGATGATGGTGTCACAGAAATGGAGGAGTTTTTCCATGGCAGCATTGAAAAGCTTCTTGAAAGGTCAGGAATTTCCCCCTCACAGATTGATGTGCTAGTGGTGAATGTTTCTATGTTCGCTGTTGTTCCTTCCTTGACTTCAAGAATCATTAACCACTACAAGATGAGGGAGGACATAAAGGCCTACAACCTCACTGGGATGGGGTGCAGTGCTAGCCTCATTTCCTTGGACATCATAAGGAACATTTTCAAGTCACAAAAGAACAAGTGTGCTCTTTTGGTGACTTCCGAGTCTCTAAGTCCAAACTGGTACAATGGCAAGGACAGATCAATGATTCTCGCCAACTGTTTGTTCAGGACCGGTGGATGTGTCATTCTCTTGACAAACAAAAGGTCCTTGAAGCAAAGGGCCATGTTCAAGTTGAAGTGCTTGGTGAGGACTCATCATGGTGCTAAAGAAGATTCCTATAGTTGCTGCAATCAGAAGGAAGATGAGCAAGGAAAGCTTGGGTTTTACCTTGCCAAAAACCTCCCCAAGGCAGCTACAAGGGCCTTTGTTGAGAACCTAAGGGTGTTGTCACCCAAGGTTTTGCCAACTAGGGAGCTCCTCAGGTTCATGATAGTGTCCCTCATAAAGAAACTGAGCCAAACTAGTTCCCTAAAGTCCTCAGGTGGTGGATCTAGCAAATCCCCTTTGAACTTCAAGACCGGGGTGGAACATTTTTGCCTCCACACAGGAGGAAAGGCTGTGATAGATGGGATTGGAAAGAGCTTGGATCTGTGTGAGTATGATCTTGAGCCAGCAAGGATGACACTGCACCGTTTTGGTAACACTTCAGCAAGTAGCCTGTGGTATGTGCTGGGGTACATGGAAGCCAAGAAGAGGCTCAAGAAAGGTGACAGAGTGTTGATGATAAGCTTTGGTGCTGGCTTTAAATGCAACAGCTGTTTGTGGGAGGTAATGAAGGATCTTGGGGATCATACAAATGTGTGGAGTTACTGCATTGATGACTACCCACCAGAGTCCTTGGCCAACCCTTTCATGGAGACCTTTGGTTGGATCAACAATGTTGAAGATGCAACCAACTTCAAACTTCCAGATTTGTTTCTCAAGTAA 1413 0.4544 MEFLSLLYGAMALYFCFLIWKLFDQRRDQECYVLDYQLYKPSDERKLGTERCGKIIGRNKHLGLNEYKFLLKAIVNSGIGEETYAPRNVIEGREANPTLDDGVTEMEEFFHGSIEKLLERSGISPSQIDVLVVNVSMFAVVPSLTSRIINHYKMREDIKAYNLTGMGCSASLISLDIIRNIFKSQKNKCALLVTSESLSPNWYNGKDRSMILANCLFRTGGCVILLTNKRSLKQRAMFKLKCLVRTHHGAKEDSYSCCNQKEDEQGKLGFYLAKNLPKAATRAFVENLRVLSPKVLPTRELLRFMIVSLIKKLSQTSSLKSSGGGSSKSPLNFKTGVEHFCLHTGGKAVIDGIGKSLDLCEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKKGDRVLMISFGAGFKCNSCLWEVMKDLGDHTNVWSYCIDDYPPESLANPFMETFGWINNVEDATNFKLPDLFLK 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00407 470 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 452 IPR012392 GO:0006633|GO:0016020|GO:0016747
Gma15g00407 470 CDD CHS_like 19 417 - -
Gma15g00407 470 PANTHER 3-KETOACYL-COA SYNTHASE 1 459 - -
Gma15g00407 470 Gene3D - 60 419 IPR016039 GO:0016746
Gma15g00407 470 SUPERFAMILY Thiolase-like 64 420 IPR016039 GO:0016746
Gma15g00407 470 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Gma15g00407 470 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 337 418 IPR013747 -
Gma15g00407 470 PANTHER 3-KETOACYL-COA SYNTHASE 1 459 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00407 Gma-Chr15 3408280 3409773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00407 19 469 Acyl Lipid Metabolism Gene Families AT2G28630 68.627 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00407 K15397 - gmx:100790992 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00407 15 3408280 3409773 Gma15g00407 15 3408280 3409773 ECH
Gma13g02958 13 44156968 44158389 Gma15g00407 15 3408280 3409773 ECH
Gma13g02958 13 44156968 44158389 Gma15g00407 15 3408280 3409773 GST
Gma15g00407 15 3408280 3409773 Gma12g00667 12 5777142 5779078 PCT
Gma15g00407 15 3408280 3409773 Gma11g01312 11 11246014 11247429 PCT
Gma12g00667 12 5777142 5779078 Gma15g00407 15 3408280 3409773 PCT
Gma11g01312 11 11246014 11247429 Gma15g00407 15 3408280 3409773 PCT