Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00348 ATGCTAGCGTCATTATCCTGCCACGGTGATATTGATAACTGGTTTTTGATATTTTCATATCTCGATGGCACCCTTTATCCTTTGAGTTCTGGATTGGCTGAGCAAGTGAAAAAAAATATTCAGGAGTACATGCTTCAAAAGCTTGGGATACCGGAGGCTAAGGTTCCTGAGTCGTGCTTTTCATTATACAAGACTTACGGGACAACCATGGCAGGTCTCAAGGCTATTGGCTATGACTTTGACTATGATGACTTTCATGCATTTATTCATGGGAGATTGCCATATGATATGCTGAAACCTGACCCTGTTCTCAGGGGAATTTTGCTGAGCTTGCCTGTTCCAAAAATTGTTTTTACAAACTCAGACAAGGTCCATGCAAGTAGAGTGCTTCATAGGCTTGGACTAGAGGATTGCTTTGAAAGAGTTATAAGCTTTGAGACCCTGAATTCCTCCAATGAAGATGGCAATGAATATAAACCAAGTTCCACAGGGATTTTTGATTTTTATGAGTACATTCGCAGGCCTGATTCTGATATTTTGCTTCCAAGGACCCCGGTTGTGTGCAAACCCTTTCAAGATGCATTTGAAAAGGTTTTCGATATGGCAGATATTGACCCTCAAAGAACATTATTCTTCGAtgacagtctccgcaatttacaaacgggaaaatccttgggcctccacacagtcatggtggctgcatcccgtcgtgctacgggagtggatcatgccttagaaagcatccataatatgaaggaggcatttccagaactgtgggaagccaatgagaagcctgaaagtgtcgagtgctcttga 816 0.3186 MLASLSCHGDIDNWFLIFSYLDGTLYPLSSGLAEQVKKNIQEYMLQKLGIPEAKVPESCFSLYKTYGTTMAGLKAIGYDFDYDDFHAFIHGRLPYDMLKPDPVLRGILLSLPVPKIVFTNSDKVHASRVLHRLGLEDCFERVISFETLNSSNEDGNEYKPSSTGIFDFYEYIRRPDSDILLPRTPVVCKPFQDAFEKVFDMADIDPQRTLFFDDSLRNLQTGKSLGLHTVMVAASRRATGVDHALESIHNMKEAFPELWEANEKPESVECS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00348 271 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 184 232 IPR006439 -
Gma15g00348 271 Gene3D - 78 259 IPR023214 -
Gma15g00348 271 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 16 271 - -
Gma15g00348 271 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 16 271 - -
Gma15g00348 271 SUPERFAMILY HAD-like 21 252 IPR036412 -
Gma15g00348 271 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 20 232 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00348 Gma-Chr15 2968379 2970341 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00348 K07025 - gmx:100777668 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00348 15 2968379 2970341 Gma15g00348 15 2968379 2970341 ECH
Gma13g03016 13 44611280 44613663 Gma15g00348 15 2968379 2970341 GST
Gma15g00348 15 2968379 2970341 Gma11g01245 11 10626904 10631110 PCT
Gma11g01245 11 10626904 10631110 Gma15g00348 15 2968379 2970341 PCT