Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01245 ATGGAAGACGGGCATAAGTTCCAGGAAGTTCCAAAGCCAAAATATGATTGTCTTTTATTTGATCTTGATGACACCCTTTATCCTTATAGTTCTGGAGTCTCAGTGCAAATAGCAAAAAATATTGATGAGTTTATGATTCAAAAGCTGGGGATGGAGGCTGCCAAAGTTGCCGAATTGAACTATCCATTATATAAGACTTATGGGACGACGATGGCTGGTTTAAGGGCAATTGGCTATGACTTTGACTATGATGACTTTAACAGTTTTGTTCATGGGAGATTGCCATATGATGTGCTGCTGAAACCAGATCCTGTTCTCAGGGGCATTTTGCAAAGCCTGCCTGTTAGGAAACTTATTTTTACGAATGCTGACTCAAACCATGCGATTAGAGCGCTTAAAACCCTTGGACTGGAGGACTGCTTTGAAAGTATTATAAGCTTTGACACTCTGAATCCCTCCAACAACACCAATCCTTCTTATAATAAAGATGGCAGTGAATCCCGATCAACCACCTCCGAAATTTTTTACTTTTGTGAGTACATAAGACCGGCGGAATCTGATATGGTGCTTCCAAGGACCCCAGTTGTCTGTAAACCCTTTGATGATGCATTTGAAAATGCTTTCAAGTTAGCAGATATTGACCCACAAAGAACATTGTTTTTTGATGACAGCATCCGCAACTTATTGACAGCCAAACGCTTGGGCCTCCACACAGTTGCAGTTGGTACATCTGTTCGTACCACCGGAGTGGATCATGCATTGGAGAGTATTCATAATATCAAGGAGGCATTCCCTGAGCTTTGGGATGCTGCTGACGAGAAGCATGAATTTGTGCAGTACAAGGTTGGAATTGAAGTAAAAGCTTAG 867 0.4164 MEDGHKFQEVPKPKYDCLLFDLDDTLYPYSSGVSVQIAKNIDEFMIQKLGMEAAKVAELNYPLYKTYGTTMAGLRAIGYDFDYDDFNSFVHGRLPYDVLLKPDPVLRGILQSLPVRKLIFTNADSNHAIRALKTLGLEDCFESIISFDTLNPSNNTNPSYNKDGSESRSTTSEIFYFCEYIRPAESDMVLPRTPVVCKPFDDAFENAFKLADIDPQRTLFFDDSIRNLLTAKRLGLHTVAVGTSVRTTGVDHALESIHNIKEAFPELWDAADEKHEFVQYKVGIEVKA 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01245 288 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 193 241 IPR006439 -
Gma11g01245 288 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 240 IPR010237 -
Gma11g01245 288 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 288 - -
Gma11g01245 288 SUPERFAMILY HAD-like 17 245 IPR036412 -
Gma11g01245 288 SFLD Haloacid Dehalogenase 11 273 - -
Gma11g01245 288 SFLD C1.5.3: 5'-Nucleotidase Like 11 273 IPR010237 -
Gma11g01245 288 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 288 - -
Gma11g01245 288 Gene3D - 79 268 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01245 Gma-Chr11 10626904 10631110 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01245 K07025 - gmx:100807005 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01245 11 10626904 10631110 Gma11g01245 11 10626904 10631110 ECH
Gma13g03016 13 44611280 44613663 Gma11g01245 11 10626904 10631110 PCT
Gma15g00348 15 2968379 2970341 Gma11g01245 11 10626904 10631110 PCT
Gma11g01245 11 10626904 10631110 Gma13g03016 13 44611280 44613663 PCT
Gma11g01245 11 10626904 10631110 Gma15g00348 15 2968379 2970341 PCT