Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03016 ATGGAAAACGGGGATCAGTTCCAGGAAATTTCAAAGGGGAAATATGATTGTCTTTTATTTGATCTTGATGACACCCTTTATCCTTTGAGTTCTGGATTGGCTGAGCAAGTGAAAAAAAATATTCAGGAGTACATGCTTCAAAAGCTTTGGATATCAGAGGCTAAAGTTCCTGAGTTGTGCTTTTCATTATACAAGACTTACGGGACAACCATGGCCGGTCTCAAGGCTATTGGCTATGACTTTGACTATGATGACTTTCATGGCTTTGTTCATGGGAGATTGCCATATGATATGCTGAAACCTGACCCTGTTCTCAGGGGAATTTTGCTAAGCTTGCCTGTTCGAAAAGTTGTTTTTACAAACTCTGACAAGGCTCATGCAAGCAGAGTGCTTCATAGGCTTGGATTGGAGGATTGCTTCGAAAGAGTTATAAGCTTTGAGACCCTTAATTCCTCCAATGAAGATGGCAGTGAATATAAACAAAGTTCCACAGAGATTTTTGATTTTTATGAGTACATTGGCAGGCCTGATTCTGATATCGTGCTTCCAAGGACCCCGGTTGTGTGCAAACCCTTTCAAGATGCATATGAAAAGGTTTTCAATATGGCAGATATTGACCCTCAAAGAACATTAttctttgatgacagtctccgcaatttacaaacgggaaaatccttgggcctccacactgtcttggtgggtacatccgttcgaactacgggagtggatcatgccttagagagcatccataatatgaaggaggcatttccagaactatgggaagccaatgaaaagcctgaaagtgtcgagtgttctagaaaggtttcaattgaaacatcagtaatagcctaa 852 0.2993 MENGDQFQEISKGKYDCLLFDLDDTLYPLSSGLAEQVKKNIQEYMLQKLWISEAKVPELCFSLYKTYGTTMAGLKAIGYDFDYDDFHGFVHGRLPYDMLKPDPVLRGILLSLPVRKVVFTNSDKAHASRVLHRLGLEDCFERVISFETLNSSNEDGSEYKQSSTEIFDFYEYIGRPDSDIVLPRTPVVCKPFQDAYEKVFNMADIDPQRTLFFDDSLRNLQTGKSLGLHTVLVGTSVRTTGVDHALESIHNMKEAFPELWEANEKPESVECSRKVSIETSVIA 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03016 283 Gene3D - 6 96 - -
Gma13g03016 283 SUPERFAMILY HAD-like 17 237 IPR036412 -
Gma13g03016 283 SFLD C1.5.3: 5'-Nucleotidase Like 12 263 IPR010237 -
Gma13g03016 283 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 233 IPR010237 -
Gma13g03016 283 Gene3D - 97 258 IPR023214 -
Gma13g03016 283 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 12 263 - -
Gma13g03016 283 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 185 233 IPR006439 -
Gma13g03016 283 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 283 - -
Gma13g03016 283 CDD HAD_5NT 17 235 IPR010237 -
Gma13g03016 283 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03016 Gma-Chr13 44611280 44613663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03016 K07025 - gmx:100790444 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03016 13 44611280 44613663 Gma13g03016 13 44611280 44613663 ECH
Gma13g03016 13 44611280 44613663 Gma15g00348 15 2968379 2970341 GST
Gma13g03016 13 44611280 44613663 Gma11g01245 11 10626904 10631110 PCT
Gma11g01245 11 10626904 10631110 Gma13g03016 13 44611280 44613663 PCT