Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00264 ATGAAGAACGACCACAACAACAACAACAACAACAGCGCCGAGCATAGCAAAGACACTACCGTTGGAATCCTAGATTCCCGATTCAACCAGACCCTCAGAAATGTTCAAGGGTTACTCAAGGGTCGTAACATTCCTGGTAAAATATTATTGAGCCAGAGGGTTGAATCTCCCGATTACACAAGCTTATCCTCACCGACTTATATAAGGAGCTCCTCATACAGTGAAACTGGCACAAGTGACCAGACATCTGAGACGGTAGAGGAGGAAGTTCACAGTACAAGTAAACCATTTGGTATTCCCAATGACAATAAGTTAAAAATATCAGCATCCAATGTAGAGAGCTCATCCGAAGAAGTCCGGAAATCTTCCATGGGTGCAAGAGCTACAGATTCTGCAAGAGTTATGAAGTTCACTAAGGTGCTTTCAGAGACAATGGTTAAATTAGAGAAATTGCGTGAATTTTCTTGGAGTGGTGTTCCAGATTATATGCGTCCTACAGTGTGGAGACTTCTCTTGGGATATGCACCACCTAATTCAGATAGAAGGGAGGGAGTTTTGAAAAGGAAGCGCCTTGAGTATCTTGACTGTGTTTCTCAGTattatgatattcctgatacagaacgctcggatgatgagatcaatatgcttcgccagattgctgttgattgtccaagaactgtacctgaagtttcattctttcaacaacagcaagttcagaaatcattggagcgtattctgtacacatgggccattcggcatcctgcaagtggatatgttcaggggataaatgatcttgttacgccatttttagttgttttcctatcagaatacttggaagggggcatagataattggtcaatgtctgatttatcttcagatgaaatctctaatatagaggccgactgctattggtgcttgtcaaagttgCTTGATGGTATGCAAGACCATTATACGTTTGCCCAACCAGGAATTCAAAGGCTTGTTTTTAAGTTGAAGGAATTGGTCAGGAGGATTGATGATCCTGCTTCAAACCATATGGAGGAGCAAGGATTGGAATTTCTTCAATTTGCTTTCCGCTGGTTCAACTGTCTTCTAATCCGCGAGATACCCTTCCATCTTGTCACACGTCTTTGGGACACATATCTAGCTGAAGGAGATGCCTTACCAGATTTCCTTGTGTATATATCTGCCAGTTTTCTTCTAACGTGGTCTGACAAGCTCCAGAAGCTTGATTTCCAAGAGATGGTAATGTTCCTTCAGCACCTTCCAACTAAGAACTGGACTCAACAGGAGCTCGAGATGGTACTTTCTCGTGCATTTATGTGGCACAGTATGTTCAACAACTCTCCGAGTCATTTAGCTAACTGA 1368 0.326 MKNDHNNNNNNSAEHSKDTTVGILDSRFNQTLRNVQGLLKGRNIPGKILLSQRVESPDYTSLSSPTYIRSSSYSETGTSDQTSETVEEEVHSTSKPFGIPNDNKLKISASNVESSSEEVRKSSMGARATDSARVMKFTKVLSETMVKLEKLREFSWSGVPDYMRPTVWRLLLGYAPPNSDRREGVLKRKRLEYLDCVSQYYDIPDTERSDDEINMLRQIAVDCPRTVPEVSFFQQQQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEYLEGGIDNWSMSDLSSDEISNIEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPASNHMEEQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLAEGDALPDFLVYISASFLLTWSDKLQKLDFQEMVMFLQHLPTKNWTQQELEMVLSRAFMWHSMFNNSPSHLAN 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00264 455 MobiDBLite consensus disorder prediction 1 20 - -
Gma15g00264 455 MobiDBLite consensus disorder prediction 56 85 - -
Gma15g00264 455 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 194 319 - -
Gma15g00264 455 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 3 452 - -
Gma15g00264 455 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 135 345 IPR035969 -
Gma15g00264 455 Gene3D - 320 455 - -
Gma15g00264 455 ProSiteProfiles TBC/rab GAP domain profile. 158 385 IPR000195 -
Gma15g00264 455 SMART tbc_4 155 411 IPR000195 -
Gma15g00264 455 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 3 452 - -
Gma15g00264 455 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 321 443 IPR035969 -
Gma15g00264 455 MobiDBLite consensus disorder prediction 56 83 - -
Gma15g00264 455 Gene3D - 135 187 - -
Gma15g00264 455 Pfam Rab-GTPase-TBC domain 162 407 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00264 Gma-Chr15 2274420 2280221 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00264 K20360 - gmx:100785695 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00264 15 2274420 2280221 Gma15g00264 15 2274420 2280221 ECH
Gma13g03100 13 45246493 45251289 Gma15g00264 15 2274420 2280221 GST
Gma15g00264 15 2274420 2280221 Gma12g00445 12 3617164 3623017 PCT
Gma15g00264 15 2274420 2280221 Gma11g01143 11 9616023 9621603 PCT
Gma12g00445 12 3617164 3623017 Gma15g00264 15 2274420 2280221 PCT
Gma11g01143 11 9616023 9621603 Gma15g00264 15 2274420 2280221 PCT