Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00233 ATGGCCGTATCTCCAATTTTGTTGTTGTTGGCTATCTTCTCTCTCATTTATGGCAATGGTATTCTTCCCATTGAAGCTACCCACCATGTTTACAGAAATCTTCCGACTCTATCTTCTGATTCCTCTGATCAACCTTATAGAACCGCTTACCATTTCCAACCTCCCAAAAATTGGATAAATGaccctaatggaccaatgaggtacaaaggactttatcatctcttctaccaatacaatccaaaaggtgctgtttggggtaatattgtgtgggcccactcagtatcaaaggatcttgtgaattggacccctctagatcatgccatctacccttctcaaccgtctgatatcaacggttgttggtcaggctcagccacaatacttcctgggggcaaaccagccattttatacacaggaattgaccctaataatcaccaagttcaaaacttagccctacccaaaaacatgtctgacccattacttagggaatgggttaagtcacccaaaaatccactaatggcaccaactagtgctaacatgatcaattcaagctcatttagggatcctaccactgcttggctaggcaaagatgggtactggagggtgctgattggaagcaaaatacacactaggggtatggcaattttgtacaagagcaaaaactttgttaattgggttcaagccaaacaacccctacattcagctgaaggcactggaatgtgggagtgccctgatttctatccagtGCTGAATAATAAACCATCATCAACTATTGGTCTTGACACATCTGTGAATGGTGATAATGTTAGGCATGTGCTTAAGGTTAGTTTGGATGATAAAAAACATGATCATTATTTGATTGGGACTTATGACATTGCCAAGGATATCTTCACTCCGGATAATGGATTTGAGGATAGTCAAACTGTCCTAAGATATGACTATGGAAAATATTATGCCTCAAAAACCATTTTTGAGGATGGAAAGAACAGAAGGgtcttattgggttgggttaatgaatcctcaagtgtttcggatgatatcaagaaaggatgggctggaatccatactattccaaggGCCATCTGGCTTCATAAATCTGGAAAACAGTTGGTGCAATGGCCGGTGGTGGAACTTGAAAGCTTACGTGTGAATCCTGTCCACTGGCCCACCAAAGTGGTCAAAGGTGGTGAAATgcttcaagttactggtgttactgcggcacagGCTGACGTTGAAATTTCATTTGACGTGAATGAGTTTGGAAAGGGCGAAGTATTGGACCAATGGGTGGATCCCCAAATTCTGTGTAGTAGAAAGGGTGCAGCCGTAAAGGGTGGTTTGGGACCCTTTGGCTTGCTAGTTTTTGCTTCTCGTGGCTTGCAAGAGTACACGGCAGTATTCTTTAGAATATTCAGATACCAAAATAAAAATTTGGTTCTCATGTGTAGCGACCAAAGCAGATCCTCTTTGAATAAAGATAACGATATGACCACCTATGGGACTTTTGTGGACATGGACCCTCTTCATGAGAAGCTGTCACTAAGAACTTTGATTGATCACTCAGTAGTGGAGAGTTTTGGAGGAGAGGGAAGGGCTTGCATCACAGCCAGAGTATATCCCACAATAGCAATTAATGAAAAGGCACAACTATATGCTTTCAATAATGGAACTGCCGCCGTCAAGATTACAAGATTGAGTGCTTGGAGCATGGAGAAGGCAAAAATAAACTGA 1728 0.25 MAVSPILLLLAIFSLIYGNGILPIEATHHVYRNLPTLSSDSSDQPYRTAYHFQPPKNWINDPNGPMRYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDHAIYPSQPSDINGCWSGSATILPGGKPAILYTGIDPNNHQVQNLALPKNMSDPLLREWVKSPKNPLMAPTSANMINSSSFRDPTTAWLGKDGYWRVLIGSKIHTRGMAILYKSKNFVNWVQAKQPLHSAEGTGMWECPDFYPVLNNKPSSTIGLDTSVNGDNVRHVLKVSLDDKKHDHYLIGTYDIAKDIFTPDNGFEDSQTVLRYDYGKYYASKTIFEDGKNRRVLLGWVNESSSVSDDIKKGWAGIHTIPRAIWLHKSGKQLVQWPVVELESLRVNPVHWPTKVVKGGEMLQVTGVTAAQADVEISFDVNEFGKGEVLDQWVDPQILCSRKGAAVKGGLGPFGLLVFASRGLQEYTAVFFRIFRYQNKNLVLMCSDQSRSSLNKDNDMTTYGTFVDMDPLHEKLSLRTLIDHSVVESFGGEGRACITARVYPTIAINEKAQLYAFNNGTAAVKITRLSAWSMEKAKIN 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00233 575 ProSitePatterns Glycosyl hydrolases family 32 active site. 51 64 IPR018053 GO:0004553|GO:0005975
Gma15g00233 575 SMART glyco_32 51 529 IPR001362 GO:0004553|GO:0005975
Gma15g00233 575 CDD GH32_Fruct1-like 57 362 - -
Gma15g00233 575 Gene3D - 384 569 - -
Gma15g00233 575 SUPERFAMILY Concanavalin A-like lectins/glucanases 373 571 IPR013320 -
Gma15g00233 575 Pfam Glycosyl hydrolases family 32 N-terminal domain 51 373 IPR013148 -
Gma15g00233 575 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 2 575 - -
Gma15g00233 575 Pfam Glycosyl hydrolases family 32 C terminal 376 568 IPR013189 -
Gma15g00233 575 Gene3D Glycosyl hydrolase domain; family 43 55 383 IPR023296 -
Gma15g00233 575 SUPERFAMILY Arabinanase/levansucrase/invertase 42 374 IPR023296 -
Gma15g00233 575 PANTHER CELL-WALL INVERTASE 2 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00233 Gma-Chr15 2045703 2049308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00233 66 575 Glycoside Hydrolase AT3G13790 64.093 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00233 K01193 - gmx:100776791 1190.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03132 13 45468086 45471452 Gma15g00233 15 2045703 2049308 GST
Gma15g00233 15 2045703 2049308 Gma07g00081 07 659380 664218 PCT
Gma15g00233 15 2045703 2049308 Gma08g01772 08 15761590 15766341 PCT
Gma07g00081 07 659380 664218 Gma15g00233 15 2045703 2049308 PCT
Gma08g01772 08 15761590 15766341 Gma15g00233 15 2045703 2049308 PCT